RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 JAG1P78504 1218 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 GPCPD1Q9NPB8 672 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 PGAP2Q9UHJ9 254 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 CLIC4Q9Y696 253 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 VEGFAP15692 232 aaPredicted RBP28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 NR5A1Q13285 461 aa28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 CCDC96Q2M329 555 aa28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 OXER1Q8TDS5 423 aa28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 GPKOWQ92917 476 aaPredicted RBP eCLIP28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 UBA5Q9GZZ9 404 aa28.41■■■□□ 2.14
AP004609.3-201ENST00000610705 NLRP5P59047 1200 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 ZNF543Q08ER8 600 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 SYAP1Q96A49 352 aaPredicted RBP28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 RRP36Q96EU6 259 aaKnown RBP28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 VAT1LQ9HCJ6 419 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 POLR3EQ9NVU0 708 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 TMEM63CQ9P1W3 806 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 ISY1Q9ULR0 285 aaKnown RBP28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 BAZ2BQ9UIF8 2168 aaKnown RBP28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 STK38Q15208 465 aa28.4■■■□□ 2.14
AP004609.3-201ENST00000610705 ANO1Q5XXA6 986 aa28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 HEATR3Q7Z4Q2 680 aa28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 HOMER1Q86YM7 354 aa28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 SIAH1Q8IUQ4 282 aa28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 SH3GLB2Q9NR46 395 aa28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 SEC63Q9UGP8 760 aaKnown RBP28.39■■■□□ 2.14
AP004609.3-201ENST00000610705 GPATCH4Q5T3I0 446 aaKnown RBP28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 PGBD1Q96JS3 809 aa28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 YEATS4O95619 227 aa28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 NASPP49321 788 aaPredicted RBP28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 SF3A1Q15459 793 aaKnown RBP28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 SLFN13Q68D06 897 aa28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 LINC00301Q8NCQ3 95 aa28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 TRPM4Q8TD43 1214 aa28.38■■■□□ 2.13
AP004609.3-201ENST00000610705 ME1P48163 572 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 ZSCAN23Q3MJ62 389 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 WWC2Q6AWC2 1192 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 BICD2Q8TD16 824 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 TEPSINQ96N21 525 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 RIOX1Q9H6W3 641 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 ZBTB21Q9ULJ3 1066 aa28.37■■■□□ 2.13
AP004609.3-201ENST00000610705 KCTD1Q719H9 257 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 KCNG4Q8TDN1 519 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 DCAF4Q8WV16 495 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 PIGSQ96S52 555 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 DEFB129Q9H1M3 183 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 DDNO94850 711 aaPredicted RBP28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 CALML3P27482 149 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 EPS15P42566 896 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 SLC1A4P43007 532 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 ANGEL2Q5VTE6 544 aaKnown RBP28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 C9orf131Q5VYM1 1079 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 CCDC148Q8NFR7 591 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 ARHGEF10LQ9HCE6 1279 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 BARHL2Q9NY43 387 aa28.36■■■□□ 2.13
AP004609.3-201ENST00000610705 MAP3K10Q02779 954 aa28.35■■■□□ 2.13
AP004609.3-201ENST00000610705 NPY5RQ15761 445 aa28.35■■■□□ 2.13
AP004609.3-201ENST00000610705 RILPL1Q5EBL4 403 aa28.35■■■□□ 2.13
AP004609.3-201ENST00000610705 TTBK2Q6IQ55 1244 aa28.35■■■□□ 2.13
AP004609.3-201ENST00000610705 F5H6K3 240 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 SPTLC2O15270 562 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 CAP2P40123 477 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 KLRC3Q07444 240 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 APOBEC3FQ8IUX4 373 aaKnown RBP28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 GMCL1P1Q8NEA9 526 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 STXBP3O00186 592 aa28.34■■■□□ 2.13
AP004609.3-201ENST00000610705 LMOD1P29536 600 aaPredicted RBP28.33■■■□□ 2.13
AP004609.3-201ENST00000610705 TYW1BQ6NUM6 668 aa28.33■■■□□ 2.13
AP004609.3-201ENST00000610705 SLC16A2P36021 539 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 ADGRF4Q8IZF3 695 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 CCDC12Q8WUD4 166 aaPredicted RBP28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 PCDHA7Q9UN72 937 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 A0A1W2PRG0 241 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 LIG1P18858 919 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 TOB1P50616 345 aaPredicted RBP28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 NAPAP54920 295 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 SLC39A14Q15043 492 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 CCDC183Q5T5S1 534 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 BLIDQ8IZY5 108 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 GGA3Q9NZ52 723 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 SYNPO2Q9UMS6 1093 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 PCDHA4Q9UN74 947 aa28.32■■■□□ 2.12
AP004609.3-201ENST00000610705 NDUFB10O96000 172 aa28.31■■■□□ 2.12
AP004609.3-201ENST00000610705 ATP2B1P20020 1258 aa28.31■■■□□ 2.12
AP004609.3-201ENST00000610705 FAM177A1Q8N128 213 aaPredicted RBP28.31■■■□□ 2.12
AP004609.3-201ENST00000610705 TNFRSF25Q93038 417 aa28.31■■■□□ 2.12
AP004609.3-201ENST00000610705 JMJD4Q9H9V9 463 aa28.31■■■□□ 2.12
AP004609.3-201ENST00000610705 FAM205CA6NFA0 338 aa28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 ECE1P42892 770 aa28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 GPR162Q16538 588 aa28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 EARS2Q5JPH6 523 aaKnown RBP28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 GMCL1Q96IK5 515 aa28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 NOL7Q9UMY1 257 aaKnown RBP28.3■■■□□ 2.12
AP004609.3-201ENST00000610705 ASNSP08243 561 aa28.29■■■□□ 2.12
AP004609.3-201ENST00000610705 HIRAP54198 1017 aaPredicted RBP28.29■■■□□ 2.12
AP004609.3-201ENST00000610705 NBPF12Q5TAG4 269 aaPredicted RBP28.29■■■□□ 2.12
AP004609.3-201ENST00000610705 GALNT17Q6IS24 598 aa28.29■■■□□ 2.12
AP004609.3-201ENST00000610705 CCAR1Q8IX12 1150 aaKnown RBP28.29■■■□□ 2.12
AP004609.3-201ENST00000610705 ACER1Q8TDN7 264 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms