RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
CTCFL-219ENST00000608720 FUT8Q9BYC5 575 aa16.56■□□□□ 0.24
CTCFL-219ENST00000608720 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
CTCFL-219ENST00000608720 BCL9LQ86UU0 1499 aa16.56■□□□□ 0.24
CTCFL-219ENST00000608720 CYP2D7A0A087X1C5 515 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 CTAGE9A4FU28 777 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 N4BP3O15049 544 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
CTCFL-219ENST00000608720 KRT31Q15323 416 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 PLCH1Q4KWH8 1693 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 XDHP47989 1333 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 CNTNAP5Q8WYK1 1306 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 ORC4O43929 436 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■□□□□ 9.7
CTCFL-219ENST00000608720 NLRP5P59047 1200 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 KIF4BQ2VIQ3 1234 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
CTCFL-219ENST00000608720 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
CTCFL-219ENST00000608720 HNRNPLLQ8WVV9 542 aaKnown RBP16.55■□□□□ 0.24
CTCFL-219ENST00000608720 SCG2P13521 617 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 PAK1Q13153 545 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 CYP26C1Q6V0L0 522 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 COPB1P53618 953 aaKnown RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 LONRF2Q1L5Z9 754 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
CTCFL-219ENST00000608720 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 STAMQ92783 540 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
CTCFL-219ENST00000608720 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 USP17L21D6R901 530 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 SRLQ86TD4 932 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 ABHD10Q9NUJ1 306 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
CTCFL-219ENST00000608720 DUOX1Q9NRD9 1551 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 LONP1P36776 959 aaKnown RBP16.53■□□□□ 0.24
CTCFL-219ENST00000608720 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
CTCFL-219ENST00000608720 TCP11X2Q5H9J9 407 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
CTCFL-219ENST00000608720 GOLGA6L1Q8N7Z2 621 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 MSANTD4Q8NCY6 345 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 NELFBQ8WX92 580 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 ZSWIM4Q9H7M6 989 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
CTCFL-219ENST00000608720 RAB21Q9UL25 225 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 ZNF652Q9Y2D9 606 aa16.53■□□□□ 0.24
CTCFL-219ENST00000608720 A0A0U1RQJ8 604 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 KCNJ18B7U540 433 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 H7C1D1 291 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 MAP2K7O14733 419 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 CALML3P27482 149 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 MCM7P33993 719 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 USP5P45974 858 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 ERVK-24P63145 666 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 ST5P78524 1137 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 KCNJ12Q14500 433 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 IL17AQ16552 155 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 WHAMMP3Q1A5X7 153 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 SLC35F6Q8N357 371 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
CTCFL-219ENST00000608720 MTRQ99707 1265 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.24
CTCFL-219ENST00000608720 VPS16Q9H269 839 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 ANKZF1Q9H8Y5 726 aa16.52■□□□□ 0.24
CTCFL-219ENST00000608720 ERLIN1O75477 346 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 RPN1P04843 607 aaKnown RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 ACRBPQ8NEB7 543 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 IVLP07476 585 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 KIF5BP33176 963 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 SIK1P57059 783 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 ICE2Q659A1 982 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 CRNKL1Q9BZJ0 848 aaKnown RBP16.51■□□□□ 0.23
CTCFL-219ENST00000608720 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 EP400Q96L91 3159 aa16.51■□□□□ 0.23
CTCFL-219ENST00000608720 COBLO75128 1261 aa16.5■□□□□ 0.23
CTCFL-219ENST00000608720 RPS6KA5O75582 802 aa16.5■□□□□ 0.23
CTCFL-219ENST00000608720 TUBBP07437 444 aa16.5■□□□□ 0.23
CTCFL-219ENST00000608720 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
CTCFL-219ENST00000608720 NSUN4Q96CB9 384 aaKnown RBP16.5■□□□□ 0.23
CTCFL-219ENST00000608720 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
CTCFL-219ENST00000608720 ZCCHC17Q9NP64 241 aaKnown RBP16.5■□□□□ 0.23
CTCFL-219ENST00000608720 ATP8A2Q9NTI2 1148 aa16.5■□□□□ 0.23
CTCFL-219ENST00000608720 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms