RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 C8orf76Q96K31 380 aa14.04□□□□□ -0.16
CTCFL-218ENST00000608440 DMGDHQ9UI17 866 aaKnown RBP14.04□□□□□ -0.16
CTCFL-218ENST00000608440 ANAPC4Q9UJX5 808 aa14.04□□□□□ -0.16
CTCFL-218ENST00000608440 PCDHA5Q9Y5H7 936 aa14.04□□□□□ -0.16
CTCFL-218ENST00000608440 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 B4DLN1 442 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 MDH1P40925 334 aaKnown RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 KDM7AQ6ZMT4 941 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 EHBP1Q8NDI1 1231 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 SSH3Q8TE77 659 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 HVCN1Q96D96 273 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 PLEKHG4BQ96PX9 1271 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 FOXN1O15353 648 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 EPB41P11171 864 aaKnown RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 IMPDH2P12268 514 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 FERP16591 822 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 LRRC23Q53EV4 343 aaPredicted RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 RRP12Q5JTH9 1297 aaKnown RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 BRAPQ7Z569 592 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 ZNF589Q86UQ0 364 aaPredicted RBP14.03□□□□□ -0.16
CTCFL-218ENST00000608440 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
CTCFL-218ENST00000608440 PDIA5Q14554 519 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 NR1I3Q14994 352 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 KIAA0825Q8IV33 1275 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 AGAP11Q8TF27 550 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 NAA15Q9BXJ9 866 aaKnown RBP14.02□□□□□ -0.16
CTCFL-218ENST00000608440 TRIM4Q9C037 500 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 RMI1Q9H9A7 625 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 GJB4Q9NTQ9 266 aa14.02□□□□□ -0.16
CTCFL-218ENST00000608440 MAP3K13O43283 966 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 FMNL1O95466 1100 aaPredicted RBP14.02□□□□□ -0.17
CTCFL-218ENST00000608440 FXR1P51114 621 aaKnown RBP eCLIP14.02□□□□□ -0.172e-8■□□□□ 9.7
CTCFL-218ENST00000608440 ERVK-24P63145 666 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 PPP1R15BQ5SWA1 713 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 LRRC1Q9BTT6 524 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 OSBPL1AQ9BXW6 950 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.17
CTCFL-218ENST00000608440 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 LEMD3Q9Y2U8 911 aa14.02□□□□□ -0.17
CTCFL-218ENST00000608440 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
CTCFL-218ENST00000608440 OATP04181 439 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 ABL2P42684 1182 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 FLIIQ13045 1269 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 BLMHQ13867 455 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 RBM41Q96IZ5 413 aaKnown RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 ZFATQ9P243 1243 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 MFAP3LO75121 409 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 MYL1P05976 194 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 ZBED6P86452 979 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 SYNE3Q6ZMZ3 975 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 EVI5LQ96CN4 794 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 GORASP1Q9BQQ3 440 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 NOP53Q9NZM5 478 aaKnown RBP14.01□□□□□ -0.17
CTCFL-218ENST00000608440 GGA2Q9UJY4 613 aa14.01□□□□□ -0.17
CTCFL-218ENST00000608440 DPPA5A6NC42 116 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 ZNF18P17022 549 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 CMA1P23946 247 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 CDC25AP30304 524 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 TRIM68Q6AZZ1 485 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 METTL16Q86W50 562 aaKnown RBP14□□□□□ -0.17
CTCFL-218ENST00000608440 SEC16BQ96JE7 1060 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 CCDC43Q96MW1 224 aaKnown RBP14□□□□□ -0.17
CTCFL-218ENST00000608440 PANK4Q9NVE7 773 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14□□□□□ -0.17
CTCFL-218ENST00000608440 H7C1W4 665 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 PPARAQ07869 468 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 ALS2CLQ60I27 953 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
CTCFL-218ENST00000608440 YIPF2Q9BWQ6 316 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 MMADHCQ9H3L0 296 aaPredicted RBP14□□□□□ -0.17
CTCFL-218ENST00000608440 SLC5A4Q9NY91 659 aa14□□□□□ -0.17
CTCFL-218ENST00000608440 RGPD2P0DJD1 1756 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 A6NHS1 94 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 SPDYE5A6NIY4 337 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 ZNF233A6NK53 670 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 MXRA7P84157 204 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 CKAP4Q07065 602 aaKnown RBP13.99□□□□□ -0.17
CTCFL-218ENST00000608440 CLASRPQ8N2M8 674 aaKnown RBP13.99□□□□□ -0.17
CTCFL-218ENST00000608440 FSD1Q9BTV5 496 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 GMNCA6NCL1 334 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 TEKT4Q8WW24 435 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 CFAP58Q5T655 872 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
CTCFL-218ENST00000608440 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
CTCFL-218ENST00000608440 CACNA2D3Q8IZS8 1091 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms