RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 TINF2Q9BSI4 451 aa19.04■□□□□ 0.64
HDDC2-203ENST00000608284 ARMT1Q9H993 441 aa19.04■□□□□ 0.64
HDDC2-203ENST00000608284 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
HDDC2-203ENST00000608284 TMEM39AQ9NV64 488 aa19.04■□□□□ 0.64
HDDC2-203ENST00000608284 DIS3Q9Y2L1 958 aaKnown RBP19.04■□□□□ 0.64
HDDC2-203ENST00000608284 TRIM43BA6NCK2 446 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 DCDC2CA8MYV0 355 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 CYP2D6P10635 497 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 AKR1A1P14550 325 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 AKR1B1P15121 316 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 RIOX2Q8IUF8 465 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 NUP133Q8WUM0 1156 aa19.03■□□□□ 0.64
HDDC2-203ENST00000608284 TRIM43Q96BQ3 446 aaPredicted RBP19.03■□□□□ 0.64
HDDC2-203ENST00000608284 CTDP1Q9Y5B0 961 aaPredicted RBP19.03■□□□□ 0.64
HDDC2-203ENST00000608284 TMEM265A0A087WTH1 108 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 PQBP1O60828 265 aaKnown RBP19.02■□□□□ 0.64
HDDC2-203ENST00000608284 CDK8P49336 464 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 FPGSQ05932 587 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 SH3RF1Q7Z6J0 888 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 MYLIPQ8WY64 445 aa19.02■□□□□ 0.64
HDDC2-203ENST00000608284 TCRBV5S4A2TA0A5A2 114 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 RAB11FIP3O75154 756 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 MBD4O95243 580 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 PGK1P00558 417 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 PGK2P07205 417 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 RLBP1P12271 317 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 EEF2P13639 858 aaKnown RBP19.01■□□□□ 0.63
HDDC2-203ENST00000608284 KIAA1755Q5JYT7 1200 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 ZSCAN25Q6NSZ9 544 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 DDX11Q96FC9 970 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 TSEN34Q9BSV6 310 aaKnown RBP19.01■□□□□ 0.63
HDDC2-203ENST00000608284 PAG1Q9NWQ8 432 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 FAM184BQ9ULE4 1060 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 DNAH12Q6ZR08 3092 aa19.01■□□□□ 0.63
HDDC2-203ENST00000608284 HSFX4A0A1B0GTS1 333 aaPredicted RBP19■□□□□ 0.63
HDDC2-203ENST00000608284 HSFX3A0A1B0GWH4 333 aaPredicted RBP19■□□□□ 0.63
HDDC2-203ENST00000608284 USP17L12C9JPN9 530 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 USP17L21D6R901 530 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 KIAA0355O15063 1070 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 C12orf60Q5U649 245 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 SIAH1Q8IUQ4 282 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
HDDC2-203ENST00000608284 MSL3Q8N5Y2 521 aaKnown RBP19■□□□□ 0.63
HDDC2-203ENST00000608284 SPC25Q9HBM1 224 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 STARD7Q9NQZ5 370 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
HDDC2-203ENST00000608284 MYO5AQ9Y4I1 1855 aaKnown RBP18.99■□□□□ 0.63
HDDC2-203ENST00000608284 A0A1W2PQ45 241 aaPredicted RBP18.99■□□□□ 0.63
HDDC2-203ENST00000608284 A0A1W2PQY0 241 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 VWA5AO00534 786 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 PRKAB2O43741 272 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 EVX2Q03828 476 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 ZNF792Q3KQV3 632 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 VTI1AQ96AJ9 217 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 BOLA2Q9H3K6 86 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
HDDC2-203ENST00000608284 ADAMTS5Q9UNA0 930 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 SLC4A4Q9Y6R1 1079 aa18.99■□□□□ 0.63
HDDC2-203ENST00000608284 UNC80Q8N2C7 3258 aa18.98■□□□□ 0.63
HDDC2-203ENST00000608284 ADD2P35612 726 aa18.98■□□□□ 0.63
HDDC2-203ENST00000608284 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
HDDC2-203ENST00000608284 C16orf86Q6ZW13 317 aa18.98■□□□□ 0.63
HDDC2-203ENST00000608284 CLEC10AQ8IUN9 316 aa18.98■□□□□ 0.63
HDDC2-203ENST00000608284 TOX2Q96NM4 488 aa18.98■□□□□ 0.63
HDDC2-203ENST00000608284 TTYH1Q9H313 450 aaPredicted RBP18.98■□□□□ 0.63
HDDC2-203ENST00000608284 MOXD2PA6NHM9 499 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 FAM83BQ5T0W9 1011 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 PANK1Q8TE04 598 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 GLT1D1Q96MS3 346 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 TEX13BQ9BXU2 312 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 FBXO28Q9NVF7 368 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 FRMPD3Q5JV73 1810 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 ZNF236Q9UL36 1845 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 MROH7Q68CQ1 1323 aa18.97■□□□□ 0.63
HDDC2-203ENST00000608284 ZBED4O75132 1171 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 ZNF865P0CJ78 1059 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-203ENST00000608284 TAL1P17542 331 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-203ENST00000608284 ATP5JP18859 108 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 ACLYP53396 1101 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 UBE3CQ15386 1083 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 ANKRD33Q7Z3H0 272 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 PCSK9Q8NBP7 692 aaKnown RBP18.96■□□□□ 0.63
HDDC2-203ENST00000608284 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
HDDC2-203ENST00000608284 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-203ENST00000608284 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
HDDC2-203ENST00000608284 SNRNP48Q6IEG0 339 aaKnown RBP18.95■□□□□ 0.62
HDDC2-203ENST00000608284 CCDC129Q6ZRS4 1044 aa18.95■□□□□ 0.62
HDDC2-203ENST00000608284 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
HDDC2-203ENST00000608284 ARPP21Q9UBL0 812 aaPredicted RBP18.95■□□□□ 0.62
HDDC2-203ENST00000608284 SYNGAP1Q96PV0 1343 aa18.95■□□□□ 0.62
HDDC2-203ENST00000608284 TIMP1P01033 207 aa18.94■□□□□ 0.62
HDDC2-203ENST00000608284 ITGB8P26012 769 aa18.94■□□□□ 0.62
HDDC2-203ENST00000608284 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
HDDC2-203ENST00000608284 PPIGQ13427 754 aaKnown RBP eCLIP18.94■□□□□ 0.62
HDDC2-203ENST00000608284 KCNA10Q16322 511 aa18.94■□□□□ 0.62
HDDC2-203ENST00000608284 PRPF38AQ8NAV1 312 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms