RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CMTR1Q8N1G2 835 aaKnown RBP12.95□□□□□ -0.34
CTCFL-214ENST00000608108 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 GBA2Q9HCG7 927 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-214ENST00000608108 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
CTCFL-214ENST00000608108 ZHX2Q9Y6X8 837 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-214ENST00000608108 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 UBE2Q2LH0YL09 131 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 SPP2Q13103 211 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 MTMR2Q13614 643 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 NTRK3Q16288 839 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 PHKBQ93100 1093 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 USP17L10C9JJH3 530 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 IFNAR1P17181 557 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 GJB2P29033 226 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 GNAQP50148 359 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
CTCFL-214ENST00000608108 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 GPATCH4Q5T3I0 446 aaKnown RBP12.94□□□□□ -0.34
CTCFL-214ENST00000608108 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 C2orf69Q8N8R5 385 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 KIAA1683Q9H0B3 1180 aa12.94□□□□□ -0.34
CTCFL-214ENST00000608108 CNTNAP5Q8WYK1 1306 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 USP14P54578 494 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 BACE1P56817 501 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 KIAA1755Q5JYT7 1200 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 CST9Q5W186 159 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
CTCFL-214ENST00000608108 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-214ENST00000608108 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-214ENST00000608108 LZTS2Q9BRK4 669 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 SLC26A6Q9BXS9 759 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
CTCFL-214ENST00000608108 GPCPD1Q9NPB8 672 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
CTCFL-214ENST00000608108 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-214ENST00000608108 BMP3P12645 472 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 PPATQ06203 517 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 SSRP1Q08945 709 aaKnown RBP12.92□□□□□ -0.34
CTCFL-214ENST00000608108 FUT2Q10981 343 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 LPAR1Q92633 364 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 RNF26Q9BY78 433 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-214ENST00000608108 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-214ENST00000608108 LOC285556D6RIA3 1793 aa12.92□□□□□ -0.34
CTCFL-214ENST00000608108 C19orf81C9J6K1 198 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 IRF6O14896 467 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 TOMM70O94826 608 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 HMGCS2P54868 508 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 DGKZQ13574 1117 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 FAM83BQ5T0W9 1011 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 OPTNQ96CV9 577 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 EMILIN3Q9NT22 766 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 TMEM232C9JQI7 657 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 CYTH3O43739 400 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 VCAM1P19320 739 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 SMARCA1P28370 1054 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 DDIT3P35638 169 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 PPIL2Q13356 520 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-214ENST00000608108 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
CTCFL-214ENST00000608108 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
CTCFL-214ENST00000608108 PRPF3O43395 683 aaKnown RBP12.9□□□□□ -0.34
CTCFL-214ENST00000608108 DEXIO95424 95 aa12.9□□□□□ -0.34
CTCFL-214ENST00000608108 SLC16A2P36021 539 aa12.9□□□□□ -0.34
CTCFL-214ENST00000608108 STAT2P52630 851 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms