RNA–Protein interactions for RNA: ENST00000606983.5

CNN2-211, Transcript of calponin 2, humanhuman

TSL 3

Gene CNN2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-211ENST00000606983 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
CNN2-211ENST00000606983 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
CNN2-211ENST00000606983 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L15C9J2P7 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L13C9JLJ4 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L11C9JVI0 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L18D6R9N7 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L22D6RA61 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L17D6RBQ6 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L19D6RCP7 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L20D6RJB6 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 OSBPP22059 807 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 GJA5P36382 358 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNN2-211ENST00000606983 USP17L24Q0WX57 530 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 TROAPQ12815 778 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
CNN2-211ENST00000606983 GRM4Q14833 912 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 RTN1Q16799 776 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 ZCCHC17Q9NP64 241 aaKnown RBP13.13□□□□□ -0.31
CNN2-211ENST00000606983 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 SLC45A1Q9Y2W3 748 aa13.13□□□□□ -0.31
CNN2-211ENST00000606983 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
CNN2-211ENST00000606983 CPLX1O14810 134 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 CDKL5O76039 1030 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 STAT2P52630 851 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
CNN2-211ENST00000606983 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
CNN2-211ENST00000606983 ANKRD23Q86SG2 305 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
CNN2-211ENST00000606983 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 MYPNQ86TC9 1320 aa13.12□□□□□ -0.31
CNN2-211ENST00000606983 NID2Q14112 1375 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 PLA2G6O60733 806 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 FLOT1O75955 427 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 FDX1P10109 184 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 MAP2K2P36507 400 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 BECN1Q14457 450 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 SNX21Q969T3 373 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 PHIPQ8WWQ0 1821 aa13.11□□□□□ -0.31
CNN2-211ENST00000606983 FRMPD2Q68DX3 1309 aaPredicted RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
CNN2-211ENST00000606983 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
CNN2-211ENST00000606983 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 PFKFB2O60825 505 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
CNN2-211ENST00000606983 COG2Q14746 738 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 CCDC144CPQ8IYA2 1237 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 BRI3BPQ8WY22 251 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
CNN2-211ENST00000606983 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
CNN2-211ENST00000606983 SLF1Q9BQI6 1058 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
CNN2-211ENST00000606983 PNMA2Q9UL42 364 aa13.1□□□□□ -0.31
CNN2-211ENST00000606983 LOC285556D6RIA3 1793 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 PDHXO00330 501 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 RXRAP19793 462 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
CNN2-211ENST00000606983 TRAF1Q13077 416 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 STK3Q13188 491 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 RAB11FIP4Q86YS3 637 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 TRIM22Q8IYM9 498 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 PRPF38AQ8NAV1 312 aaKnown RBP13.09□□□□□ -0.31
CNN2-211ENST00000606983 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
CNN2-211ENST00000606983 MAD2L2Q9UI95 211 aa13.09□□□□□ -0.31
CNN2-211ENST00000606983 BTBD19C9JJ37 291 aa13.08□□□□□ -0.32
CNN2-211ENST00000606983 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
CNN2-211ENST00000606983 ZBED4O75132 1171 aa13.08□□□□□ -0.32
CNN2-211ENST00000606983 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.32
CNN2-211ENST00000606983 TM4SF4P48230 202 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms