RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
LINC01235-201ENST00000604724 STXBP3O00186 592 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 CAVIN2O95810 425 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 PDHBP11177 359 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 DPEP1P16444 411 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 TTC38Q5R3I4 469 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 PCDHA4Q9UN74 947 aa12.41□□□□□ -0.42
LINC01235-201ENST00000604724 M0R2N6 131 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 HLA-DOAP06340 250 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 CLCN1P35523 988 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 UBA5Q9GZZ9 404 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 PSME4Q14997 1843 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 CALML3P27482 149 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 PTGDRQ13258 359 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 FOXP4Q8IVH2 680 aaPredicted RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 PDILTQ8N807 584 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 IDI2Q9BXS1 227 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 ZNF277Q9NRM2 450 aaPredicted RBP12.4□□□□□ -0.42
LINC01235-201ENST00000604724 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 ZKSCAN5Q9Y2L8 839 aa12.4□□□□□ -0.42
LINC01235-201ENST00000604724 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.43
LINC01235-201ENST00000604724 A0A087X0B3 334 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 CEP57L1Q8IYX8 460 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 AOPEPQ8N6M6 819 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 PIGSQ96S52 555 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 EHD4Q9H223 541 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 TUBE1Q9UJT0 475 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 TTLL1O95922 423 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 MCM7P33993 719 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 PRMT6Q96LA8 375 aaPredicted RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 PCDHA6Q9UN73 950 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 PCDHA8Q9Y5H6 950 aa12.39□□□□□ -0.43
LINC01235-201ENST00000604724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
LINC01235-201ENST00000604724 RAD17O75943 681 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 NLRP12P59046 1061 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 ATP2C1P98194 919 aaPredicted RBP12.38□□□□□ -0.43
LINC01235-201ENST00000604724 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
LINC01235-201ENST00000604724 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 BECN2A8MW95 431 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 ZBTB7AO95365 584 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 ATP2B2Q01814 1243 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 ZRSR1Q15695 479 aaKnown RBP12.38□□□□□ -0.43
LINC01235-201ENST00000604724 IL17AQ16552 155 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 CCDC148Q8NFR7 591 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
LINC01235-201ENST00000604724 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
LINC01235-201ENST00000604724 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
LINC01235-201ENST00000604724 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 ZNF75DP51815 510 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 NAPAP54920 295 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
LINC01235-201ENST00000604724 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
LINC01235-201ENST00000604724 PSMD1Q99460 953 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms