RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 LRRC10BA6NIK2 292 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 IFNAR1P17181 557 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
CDCA3-212ENST00000604599 EHBP1Q8NDI1 1231 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-212ENST00000604599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDCA3-212ENST00000604599 NELFBQ8WX92 580 aa13.94□□□□□ -0.18
CDCA3-212ENST00000604599 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDCA3-212ENST00000604599 MYH10P35580 1976 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 H7C1W4 665 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 HSF2BPO75031 334 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 PPARDQ03181 441 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 SPAG1Q07617 926 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 DDR1Q08345 913 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 NEDD9Q14511 834 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 IQCEQ6IPM2 695 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 MYH13Q9UKX3 1938 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 SKOR1P84550 965 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-212ENST00000604599 NAA35Q5VZE5 725 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 N4BP2L2Q92802 583 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-212ENST00000604599 ZSWIM5Q9P217 1185 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 XDHP47989 1333 aa13.93□□□□□ -0.18
CDCA3-212ENST00000604599 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 TRIM75PA6NK02 468 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 WNT7AO00755 349 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 CHUKO15111 745 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 ELF1P32519 619 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 KRT83P78385 493 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 APBA1Q02410 837 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 CTDSPL2Q05D32 466 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 NNTQ13423 1086 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 ZIM3Q96PE6 472 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 A1CFQ9NQ94 594 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 PHF8Q9UPP1 1060 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 MYH7P12883 1935 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 IDH1O75874 414 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 IPO7O95373 1038 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 LSP1P33241 339 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 SEC24CP53992 1094 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 RTN1Q16799 776 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 ZNF622Q969S3 477 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 RNPC3Q96LT9 517 aaKnown RBP13.92□□□□□ -0.18
CDCA3-212ENST00000604599 DNAJC7Q99615 494 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 GDAQ9Y2T3 454 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
CDCA3-212ENST00000604599 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 CXCR5P32302 372 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 EPHB4P54760 987 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 NAP1L1P55209 391 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 CREG2Q8IUH2 290 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 KLC4Q9NSK0 619 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 ATXN2Q99700 1313 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 ANO9A1A5B4 782 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 MB21D1Q8N884 522 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 MCM8Q9UJA3 840 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 BCL9LQ86UU0 1499 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 KCNA6P17658 529 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 NF2P35240 595 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 IFT88Q13099 833 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 CCDC13Q8IYE1 715 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 KCNH5Q8NCM2 988 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 SPATA4Q8NEY3 305 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 ZNF473Q8WTR7 871 aaKnown RBP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 STAG1Q8WVM7 1258 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDCA3-212ENST00000604599 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
CDCA3-212ENST00000604599 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 C21orf2O43822 256 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDCA3-212ENST00000604599 CYLC1P35663 651 aaPredicted RBP13.9□□□□□ -0.18
CDCA3-212ENST00000604599 MCAMP43121 646 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 HDLBPQ00341 1268 aaKnown RBP13.9□□□□□ -0.18
CDCA3-212ENST00000604599 LMOD2Q6P5Q4 547 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 TTLL7Q6ZT98 887 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 CEP57Q86XR8 500 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 MMGT1Q8N4V1 131 aa13.9□□□□□ -0.18
CDCA3-212ENST00000604599 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms