RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 TCTN2Q96GX1 697 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 FERD3LQ96RJ6 166 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 EPB41L4BQ9H329 900 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 GPR160Q9UJ42 338 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 FBXL21Q9UKT6 434 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 SYPP08247 313 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 NME1P15531 152 aaKnown RBP8.72□□□□□ -1.01
TUBE1-205ENST00000603651 RAP1GAPP47736 663 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 LRRFIP1Q32MZ4 808 aaKnown RBP8.72□□□□□ -1.01
TUBE1-205ENST00000603651 SIRT2Q8IXJ6 389 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 TMEM192Q8IY95 271 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 FBXO15Q8NCQ5 510 aaPredicted RBP8.72□□□□□ -1.01
TUBE1-205ENST00000603651 RNF34Q969K3 372 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 SLC6A18Q96N87 628 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 HDAC8Q9BY41 377 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 PRDM14Q9GZV8 571 aa8.72□□□□□ -1.01
TUBE1-205ENST00000603651 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 DBX1A6NMT0 343 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 PRAMEF1O95521 474 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 RAD51AP2Q09MP3 1159 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 DUSP4Q13115 394 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 ZPBP2Q6X784 338 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 USHBP1Q8N6Y0 703 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
TUBE1-205ENST00000603651 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 EBF1Q9UH73 591 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 TCFL5Q9UL49 500 aa8.71□□□□□ -1.02
TUBE1-205ENST00000603651 PCBP3P57721 371 aaKnown RBP8.7□□□□□ -1.02
TUBE1-205ENST00000603651 FAM86C1Q9NVL1 165 aa8.7□□□□□ -1.02
TUBE1-205ENST00000603651 USP2O75604 605 aaPredicted RBP8.69□□□□□ -1.02
TUBE1-205ENST00000603651 PDE6BP35913 854 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 TDRD10Q5VZ19 366 aaKnown RBP8.69□□□□□ -1.02
TUBE1-205ENST00000603651 RNF111Q6ZNA4 994 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 SPPL2CQ8IUH8 684 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 LILRA2Q8N149 483 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 ENOX1Q8TC92 643 aaKnown RBP8.69□□□□□ -1.02
TUBE1-205ENST00000603651 PPP1R16BQ96T49 567 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 SP110Q9HB58 689 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
TUBE1-205ENST00000603651 NFIBO00712 420 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 PSPNO60542 156 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 TMEM253P0C7T8 217 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 SLC14A2Q15849 920 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 CHST7Q9NS84 486 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 PPT2Q9UMR5 302 aa8.68□□□□□ -1.02
TUBE1-205ENST00000603651 RACK1P63244 317 aaKnown RBP8.67□□□□□ -1.02
TUBE1-205ENST00000603651 CHRNEQ04844 493 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 ZNF605Q86T29 641 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
TUBE1-205ENST00000603651 ANKS4BQ8N8V4 417 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 METTL5Q9NRN9 209 aaKnown RBP8.67□□□□□ -1.02
TUBE1-205ENST00000603651 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 PCDHB12Q9Y5F1 795 aa8.67□□□□□ -1.02
TUBE1-205ENST00000603651 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 TNFRSF10CO14798 259 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 SIGLEC6O43699 453 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 RECKO95980 971 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 CCNFP41002 786 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 CCDC81Q6ZN84 652 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 CEP128Q6ZU80 1094 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 ANKLE2Q86XL3 938 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 DSCC1Q9BVC3 393 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 SLC6A17Q9H1V8 727 aa8.66□□□□□ -1.02
TUBE1-205ENST00000603651 TP53P04637 393 aaPredicted RBP8.65□□□□□ -1.02
TUBE1-205ENST00000603651 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
TUBE1-205ENST00000603651 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
TUBE1-205ENST00000603651 RUFY4Q6ZNE9 571 aa8.65□□□□□ -1.02
TUBE1-205ENST00000603651 KCNN1Q92952 543 aa8.65□□□□□ -1.02
TUBE1-205ENST00000603651 INTS4Q96HW7 963 aaKnown RBP8.65□□□□□ -1.02
TUBE1-205ENST00000603651 G6PC3Q9BUM1 346 aa8.65□□□□□ -1.02
TUBE1-205ENST00000603651 DDX41Q9UJV9 622 aaKnown RBP8.65□□□□□ -1.02
TUBE1-205ENST00000603651 C9IYK1 514 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
TUBE1-205ENST00000603651 TSPAN15O95858 294 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 ACRP10323 421 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
TUBE1-205ENST00000603651 TMEM132EQ6IEE7 984 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 ATG14Q6ZNE5 492 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 MAP6Q96JE9 813 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 CDADC1Q9BWV3 514 aa8.64□□□□□ -1.03
TUBE1-205ENST00000603651 CWC22Q9HCG8 908 aaKnown RBP8.64□□□□□ -1.03
TUBE1-205ENST00000603651 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
TUBE1-205ENST00000603651 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
TUBE1-205ENST00000603651 TMEM82A0PJX8 343 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 IMPDH2P12268 514 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 PAK2Q13177 524 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 NR0B2Q15466 257 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 ADGRF1Q5T601 910 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 CRTC3Q6UUV7 619 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
TUBE1-205ENST00000603651 TOX2Q96NM4 488 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms