RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GPRASP2Q96D09 838 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 YIPF4Q9BSR8 244 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CTNNA3Q9UI47 895 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 N6AMT1Q9Y5N5 214 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 PLEKHH2Q8IVE3 1493 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 IL16Q14005 1332 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 MYO1CO00159 1063 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 KLF4O43474 513 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 AKR1B10O60218 316 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 RASGRP1O95267 797 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ECE1P42892 770 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 FKBP4Q02790 459 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 PIN1Q13526 163 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 SEPT6Q14141 434 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ASIC2Q16515 512 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 FKBP15Q5T1M5 1219 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 IQCEQ6IPM2 695 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 CCBE1Q6UXH8 406 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 IFNL2Q8IZJ0 200 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 STAG2Q8N3U4 1231 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 N4BP2L2Q92802 583 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 DESI2Q9BSY9 194 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 RBSNQ9H1K0 784 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ZCCHC17Q9NP64 241 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 AASDHPPTQ9NRN7 309 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 POLKQ9UBT6 870 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 EGFL7Q9UHF1 273 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 PFDN2Q9UHV9 154 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF232Q9UNY5 417 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 PHLPP1O60346 1717 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 CTIFO43310 598 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 DXOO77932 396 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 IFIT1P09914 478 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 IDEP14735 1019 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 PICALMQ13492 652 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 LAMC2Q13753 1193 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 NOLC1Q14978 699 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 MCTP2Q6DN12 878 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 LILRB1Q8NHL6 650 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 KIFC2Q96AC6 838 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ANAPC16Q96DE5 110 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 BARD1Q99728 777 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 VPS33BQ9H267 617 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 RWDD1Q9H446 243 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 ALG13Q9NP73 1137 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 TMEM260Q9NX78 707 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 CXXC1Q9P0U4 656 aaPredicted RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 CDV3Q9UKY7 258 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 DMTF1Q9Y222 760 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 SLIT1O75093 1534 aa5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 EIF2AK4Q9P2K8 1649 aaKnown RBP5.73□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC7Q96M83 1385 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 WASLO00401 505 aaPredicted RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ADH1BP00325 375 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 SLC7A5Q01650 507 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ADCY2Q08462 1091 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ITKQ08881 620 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 CBX2Q14781 532 aaPredicted RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 SHROOM1Q2M3G4 852 aaPredicted RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TTC31Q49AM3 519 aaPredicted RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ARSHQ5FYA8 562 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC129Q6ZRS4 1044 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 C16orf86Q6ZW13 317 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ADAM32Q8TC27 787 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TRERF1Q96PN7 1200 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 SLC7A5P2Q9GIP4 190 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 BLOC1S4Q9NUP1 217 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 RRN3Q9NYV6 651 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 CWC15Q9P013 229 aaKnown RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF69Q9UC07 566 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF180Q9UJW8 692 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 DIP2AQ14689 1571 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TMEM110-MUSTN1A8MSY1 372 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TRIM37O94972 964 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 PYGLP06737 847 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 SMARCA1P28370 1054 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 GTF2A2P52657 109 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 SH3BGRP55822 239 aaPredicted RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 UBXN2AP68543 259 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ROR1Q01973 937 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TRAF1Q13077 416 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 AMOTQ4VCS5 1084 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 LARP1Q6PKG0 1096 aaKnown RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 BRSK2Q8IWQ3 736 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 FBF1Q8TES7 1133 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 HAUS7Q99871 368 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF700Q9H0M5 742 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 EVA1BQ9NVM1 165 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 KCTD5Q9NXV2 234 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 GTF2IRD1Q9UHL9 959 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 TPCN1Q9ULQ1 816 aa5.72□□□□□ -1.49
SPTBN1-206ENST00000602898 MPSTP25325 297 aa5.71□□□□□ -1.49
SPTBN1-206ENST00000602898 KIF5BP33176 963 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms