RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 FAM83BQ5T0W9 1011 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 TMTC2Q8N394 836 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 TMEM87BQ96K49 555 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 CPA4Q9UI42 421 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 ADAMTS5Q9UNA0 930 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
RNF40-212ENST00000602784 PRC1O43663 620 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 DSG3P32926 999 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
RNF40-212ENST00000602784 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
RNF40-212ENST00000602784 MB21D1Q8N884 522 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
RNF40-212ENST00000602784 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 NUP88Q99567 741 aaPredicted RBP16.28■□□□□ 0.2
RNF40-212ENST00000602784 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
RNF40-212ENST00000602784 RLFQ13129 1914 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 PSMA5P28066 241 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
RNF40-212ENST00000602784 TMEM67Q5HYA8 995 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
RNF40-212ENST00000602784 SEC24BO95487 1268 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 FDX1P10109 184 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 PDHBP11177 359 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 LIFRP42702 1097 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 STAT2P52630 851 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 ANAPC15P60006 121 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 LACTBP83111 547 aaPredicted RBP16.26■□□□□ 0.19
RNF40-212ENST00000602784 WTAPQ15007 396 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 ARHGEF6Q15052 776 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 CHST3Q7LGC8 479 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 TM6SF1Q9BZW5 370 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 FBXO28Q9NVF7 368 aa16.26■□□□□ 0.19
RNF40-212ENST00000602784 TMEM232C9JQI7 657 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 VWA5AO00534 786 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 GNRH1P01148 92 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 ERVK-24P63145 666 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 COL9A3Q14050 684 aaPredicted RBP16.25■□□□□ 0.19
RNF40-212ENST00000602784 KIF22Q14807 665 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
RNF40-212ENST00000602784 BTNL9Q6UXG8 535 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
RNF40-212ENST00000602784 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 TXNRD2Q9NNW7 524 aa16.25■□□□□ 0.19
RNF40-212ENST00000602784 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 SH2B2O14492 632 aaPredicted RBP16.24■□□□□ 0.19
RNF40-212ENST00000602784 CNMDO75829 334 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 CCNA1P78396 465 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 ZNF543Q08ER8 600 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 KCTD1Q719H9 257 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 FBXL16Q8N461 479 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 ATG4CQ96DT6 458 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 MAP3K14Q99558 947 aa16.24■□□□□ 0.19
RNF40-212ENST00000602784 TROAPQ12815 778 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 PAGR1Q9BTK6 254 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 SENP2Q9HC62 589 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 BTBD7Q9P203 1132 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
RNF40-212ENST00000602784 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 ZBED4O75132 1171 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 PARP1P09874 1014 aaKnown RBP16.22■□□□□ 0.19
RNF40-212ENST00000602784 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 PSMC4P43686 418 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 FCGRTP55899 365 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 Q3C1V9 767 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 REPS2Q8NFH8 660 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 KIFC2Q96AC6 838 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
RNF40-212ENST00000602784 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
RNF40-212ENST00000602784 ISY1Q9ULR0 285 aaKnown RBP16.22■□□□□ 0.19
RNF40-212ENST00000602784 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 DDAH1O94760 285 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
RNF40-212ENST00000602784 MAPK4P31152 587 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms