RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 CPLX3Q8WVH0 158 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 ODF2LQ9ULJ1 636 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 SLC3A2P08195 630 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 ADKP55263 362 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 PNKPQ96T60 521 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 BAG1Q99933 345 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 CRACR2AQ9BSW2 395 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 MAP2K7O14733 419 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 MYO1FO00160 1098 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 NAA25Q14CX7 972 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 CABS1Q96KC9 395 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 FAM196BA6NMK8 535 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 ELF1P32519 619 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 CDR1P51861 262 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 NBPF3Q9H094 633 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 VAT1LQ9HCJ6 419 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
PPFIA3-206ENST00000602655 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 TFRCP02786 760 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 PEX19P40855 299 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 CLNS1AP54105 237 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 ZNF569Q5MCW4 686 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 RSRC2Q7L4I2 434 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 CCDC189A1A4V9 331 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 VSNL1P62760 191 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 PPARAQ07869 468 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 ZNF384Q8TF68 577 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 KCNJ14Q9UNX9 436 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 C21orf2O43822 256 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 STK38Q15208 465 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 PCDHAC2Q9Y5I4 1007 aa17.29■□□□□ 0.36
PPFIA3-206ENST00000602655 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 POLRMTO00411 1230 aaKnown RBP17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 IRF6O14896 467 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 ARHGAP6O43182 974 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 KIF5CO60282 957 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 SH3RF3Q8TEJ3 882 aaPredicted RBP17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 TCRBV5S4A2TA0A5A2 114 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 MARCKSP29966 332 aaPredicted RBP17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 PPARDQ03181 441 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 L1RE1Q9UN81 338 aa17.28■□□□□ 0.36
PPFIA3-206ENST00000602655 CTAGE15A4D2H0 777 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 ZBTB43O43298 467 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CTAGE8P0CG41 777 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CTAGE6Q86UF2 777 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CTAGE4Q8IX94 777 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 NSUN7Q8NE18 718 aaKnown RBP17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 DPF2Q92785 391 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 EHD4Q9H223 541 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 COL4A1P02462 1669 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CTDNEP1O95476 244 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CDC27P30260 824 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 WTAPQ15007 396 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 TOGARAM2Q6ZUX3 1019 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CLEC10AQ8IUN9 316 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CEP112Q8N8E3 955 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CEP120Q8N960 986 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 CD209Q9NNX6 404 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 KCND1Q9NSA2 647 aa17.27■□□□□ 0.36
PPFIA3-206ENST00000602655 PCNTO95613 3336 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 GOLGA6L9A6NEM1 432 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 IGSF22Q8N9C0 903 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 FAM76AQ8TAV0 307 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 UIMC1Q96RL1 719 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 NUP98P52948 1817 aa17.27■□□□□ 0.35
PPFIA3-206ENST00000602655 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 SKAP2O75563 359 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms