RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TCP11L1Q9NUJ3 509 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 GJD2Q9UKL4 321 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 ADAMTS5Q9UNA0 930 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 STX8Q9UNK0 236 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 LAMA4Q16363 1823 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 PARP14Q460N5 1801 aa19.78■□□□□ 0.76
SSBP4-213ENST00000602088 GRK4P32298 578 aa19.77■□□□□ 0.76
SSBP4-213ENST00000602088 PTH1RQ03431 593 aa19.77■□□□□ 0.76
SSBP4-213ENST00000602088 CCAR1Q8IX12 1150 aaKnown RBP19.77■□□□□ 0.76
SSBP4-213ENST00000602088 NKX2-3Q8TAU0 364 aa19.77■□□□□ 0.76
SSBP4-213ENST00000602088 NEDD4P46934 1319 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 A0A0G2JMZ2 1700 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 NT5C2P49902 561 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 SOX10P56693 466 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 GPR142Q7Z601 462 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 PXYLP1Q8TE99 480 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 ESR2Q92731 530 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 PPP1R9AQ9ULJ8 1098 aa19.76■□□□□ 0.75
SSBP4-213ENST00000602088 ADCY3O60266 1144 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 RGS19P49795 217 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 SLFN13Q68D06 897 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 SAMD1Q6SPF0 538 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-213ENST00000602088 PLEKHH3Q7Z736 793 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 SLAIN1Q8ND83 568 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 GMCL1Q96IK5 515 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 MOV10L1Q9BXT6 1211 aaKnown RBP19.75■□□□□ 0.75
SSBP4-213ENST00000602088 SPATC1LQ9H0A9 340 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 PPP4R2Q9NY27 417 aa19.75■□□□□ 0.75
SSBP4-213ENST00000602088 PLXNB2O15031 1838 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 VWA5AO00534 786 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 PRPF38AQ8NAV1 312 aaKnown RBP19.74■□□□□ 0.75
SSBP4-213ENST00000602088 USP6NLQ92738 828 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 MAP4K1Q92918 833 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 NUDT12Q9BQG2 462 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 SLF1Q9BQI6 1058 aa19.74■□□□□ 0.75
SSBP4-213ENST00000602088 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-213ENST00000602088 BMP3P12645 472 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 ELNP15502 786 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 TMEM132BQ14DG7 1078 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 MORN1Q5T089 497 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 RCSD1Q6JBY9 416 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 SHCBP1Q8NEM2 672 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 SOCS4Q8WXH5 440 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 TTC14Q96N46 770 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 ESYT1Q9BSJ8 1104 aa19.73■□□□□ 0.75
SSBP4-213ENST00000602088 BIN2Q9UBW5 565 aaPredicted RBP19.73■□□□□ 0.75
SSBP4-213ENST00000602088 COL11A1P12107 1806 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-213ENST00000602088 KDM4AO75164 1064 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 CYP21A2P08686 494 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
SSBP4-213ENST00000602088 MCCP23508 829 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 PLS1Q14651 629 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 WDR78Q5VTH9 848 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 REPS2Q8NFH8 660 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 KRT23Q9C075 422 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 CNNM2Q9H8M5 875 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
SSBP4-213ENST00000602088 FEM1BQ9UK73 627 aa19.72■□□□□ 0.75
SSBP4-213ENST00000602088 KIAA0100Q14667 2235 aaKnown RBP19.72■□□□□ 0.75
SSBP4-213ENST00000602088 BRCA2P51587 3418 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 B4E1Z4 1266 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 XRCC5P13010 732 aaKnown RBP19.71■□□□□ 0.75
SSBP4-213ENST00000602088 PTPREP23469 700 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 SLC1A4P43007 532 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 MROH8Q9H579 483 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 ZSWIM5Q9P217 1185 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 ZNF214Q9UL59 606 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-213ENST00000602088 IVNS1ABPQ9Y6Y0 642 aa19.71■□□□□ 0.75
SSBP4-213ENST00000602088 SLC15A5A6NIM6 579 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 TMEM232C9JQI7 657 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 MYCP01106 439 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-213ENST00000602088 ERCC3P19447 782 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 CYP2B6P20813 491 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 UBXN2AP68543 259 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 MTFR1Q15390 333 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 CCDC178Q5BJE1 867 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 KIAA1211Q6ZU35 1233 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 IQCA1Q86XH1 822 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 DGKHQ86XP1 1220 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 ZKSCAN3Q9BRR0 538 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 TMEM106CQ9BVX2 250 aa19.7■□□□□ 0.74
SSBP4-213ENST00000602088 LSG1Q9H089 658 aaKnown RBP19.7■□□□□ 0.74
SSBP4-213ENST00000602088 POTEFA5A3E0 1075 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 STRNO43815 780 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 PLA2G6O60733 806 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 ZBED4O75132 1171 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 SLC25A27O95847 323 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 INHAP05111 366 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 STAT3P40763 770 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 RGS2P41220 211 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 MAP2K5Q13163 448 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 GRB14Q14449 540 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 KCTD1Q719H9 257 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 RIOX2Q8IUF8 465 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 CHURC1Q8WUH1 139 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 DCAF4Q8WV16 495 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 KIFC2Q96AC6 838 aa19.69■□□□□ 0.74
SSBP4-213ENST00000602088 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms