RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 FRMPD2Q68DX3 1309 aaPredicted RBP23.86■■□□□ 1.41
PNKP-215ENST00000600910 NID2Q14112 1375 aa23.86■■□□□ 1.41
PNKP-215ENST00000600910 PARP1P09874 1014 aaKnown RBP23.85■■□□□ 1.41
PNKP-215ENST00000600910 GOLGA8HP0CJ92 632 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 SCRN1Q12765 414 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 RTN1Q16799 776 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 CCDC96Q2M329 555 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 C12orf42Q96LP6 360 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 MAD2L2Q9UI95 211 aa23.85■■□□□ 1.41
PNKP-215ENST00000600910 VCAM1P19320 739 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 CDC27P30260 824 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 ZNF543Q08ER8 600 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 SNAPC2Q13487 334 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 KCTD1Q719H9 257 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 STAG2Q8N3U4 1231 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 GTF3C6Q969F1 213 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 FAM217BQ9NTX9 383 aaPredicted RBP23.84■■□□□ 1.41
PNKP-215ENST00000600910 ISY1Q9ULR0 285 aaKnown RBP23.84■■□□□ 1.41
PNKP-215ENST00000600910 SLC10A3P09131 477 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 BMP3P12645 472 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 KIF5BP33176 963 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 ADD1P35611 737 aaKnown RBP23.84■■□□□ 1.41
PNKP-215ENST00000600910 ASPRV1Q53RT3 343 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 FAM83BQ5T0W9 1011 aa23.84■■□□□ 1.41
PNKP-215ENST00000600910 PALM3A6NDB9 673 aaPredicted RBP23.83■■□□□ 1.41
PNKP-215ENST00000600910 WDR46O15213 610 aaKnown RBP23.83■■□□□ 1.41
PNKP-215ENST00000600910 GTF2A2P52657 109 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 ST3GAL1Q11201 340 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 PPP2R5BQ15173 497 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 GPATCH4Q5T3I0 446 aaKnown RBP23.83■■□□□ 1.41
PNKP-215ENST00000600910 GADL1Q6ZQY3 521 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 MS4A4AQ96JQ5 239 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 GPCPD1Q9NPB8 672 aa23.83■■□□□ 1.41
PNKP-215ENST00000600910 RBM28Q9NW13 759 aaKnown RBP23.83■■□□□ 1.41
PNKP-215ENST00000600910 LOC285556D6RIA3 1793 aa23.82■■□□□ 1.4
PNKP-215ENST00000600910 PAXIP1Q6ZW49 1069 aaPredicted RBP23.82■■□□□ 1.4
PNKP-215ENST00000600910 CCDC83Q8IWF9 413 aa23.82■■□□□ 1.4
PNKP-215ENST00000600910 PROCA1Q8NCQ7 364 aaPredicted RBP23.82■■□□□ 1.4
PNKP-215ENST00000600910 CCDC102AQ96A19 550 aa23.82■■□□□ 1.4
PNKP-215ENST00000600910 CCDC196A0A1B0GTZ2 297 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 FAM155AB1AL88 458 aaPredicted RBP23.81■■□□□ 1.4
PNKP-215ENST00000600910 KLRF2D3W0D1 207 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 PLEKHA8P1O95397 391 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 MOGSQ13724 837 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 BECN1Q14457 450 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 TTBK2Q6IQ55 1244 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 RPAP3Q9H6T3 665 aaPredicted RBP23.81■■□□□ 1.4
PNKP-215ENST00000600910 RASSF10A6NK89 507 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 CETPP11597 493 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 DEFB115Q30KQ5 88 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 TREML2Q5T2D2 321 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 CYP4F22Q6NT55 531 aa23.81■■□□□ 1.4
PNKP-215ENST00000600910 FASTKD5Q7L8L6 764 aaKnown RBP23.81■■□□□ 1.4
PNKP-215ENST00000600910 CMTR1Q8N1G2 835 aaKnown RBP23.81■■□□□ 1.4
PNKP-215ENST00000600910 TMEM232C9JQI7 657 aa23.8■■□□□ 1.4
PNKP-215ENST00000600910 DHX16O60231 1041 aaKnown RBP23.8■■□□□ 1.4
PNKP-215ENST00000600910 GNAQP50148 359 aa23.8■■□□□ 1.4
PNKP-215ENST00000600910 TMTC3Q6ZXV5 915 aa23.8■■□□□ 1.4
PNKP-215ENST00000600910 TANGO6Q9C0B7 1094 aa23.8■■□□□ 1.4
PNKP-215ENST00000600910 CPVLQ9H3G5 476 aa23.8■■□□□ 1.4
PNKP-215ENST00000600910 CCL15-CCL14A0A0B4J2E2 113 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 CPLX1O14810 134 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 GRM1Q13255 1194 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 CCL15Q16663 113 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 NBPF11Q86T75 865 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 CCDC82Q8N4S0 544 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 SRBD1Q8N5C6 995 aaKnown RBP23.79■■□□□ 1.4
PNKP-215ENST00000600910 UBA5Q9GZZ9 404 aa23.79■■□□□ 1.4
PNKP-215ENST00000600910 SLC16A2P36021 539 aa23.78■■□□□ 1.4
PNKP-215ENST00000600910 STAT2P52630 851 aa23.78■■□□□ 1.4
PNKP-215ENST00000600910 IKQ13123 557 aaPredicted RBP23.78■■□□□ 1.4
PNKP-215ENST00000600910 NTRK3Q16288 839 aa23.78■■□□□ 1.4
PNKP-215ENST00000600910 BRI3BPQ8WY22 251 aa23.78■■□□□ 1.4
PNKP-215ENST00000600910 AGTPBP1Q9UPW5 1226 aa23.78■■□□□ 1.4
PNKP-215ENST00000600910 DTNBO60941 627 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 HTRA3P83110 453 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 CUL4AQ13619 759 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 FBXO28Q9NVF7 368 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 FEM1BQ9UK73 627 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 MANSC4A6NHS7 340 aaPredicted RBP23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L15C9J2P7 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L13C9JLJ4 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L11C9JVI0 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L18D6R9N7 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L22D6RA61 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L17D6RBQ6 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L19D6RCP7 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L20D6RJB6 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 PPFIA3O75145 1194 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 CTDNEP1O95476 244 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 USP17L24Q0WX57 530 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 SLC35G1Q2M3R5 365 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 GPAT2Q6NUI2 795 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 CPLX2Q6PUV4 134 aaKnown RBP23.77■■□□□ 1.4
PNKP-215ENST00000600910 CATSPERGQ6ZRH7 1159 aa23.77■■□□□ 1.4
PNKP-215ENST00000600910 CYTH3O43739 400 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 FLOT1O75955 427 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 IFNAR1P17181 557 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 FUT2Q10981 343 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms