RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 SLC15A5A6NIM6 579 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 F5H6K3 240 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 HIP1O00291 1037 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 NDUFB10O96000 172 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 FGAP02671 866 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 HSPD1P10809 573 aaKnown RBP19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 ZKSCAN1P17029 563 aaPredicted RBP19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 PTPREP23469 700 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 KLRC3Q07444 240 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 MAP2K5Q13163 448 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 PLS1Q14651 629 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 PAK6Q9NQU5 681 aaPredicted RBP19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 FBXO28Q9NVF7 368 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 SYNPO2Q9UMS6 1093 aa19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.97■□□□□ 0.79
NOTCH3-205ENST00000600841 SGPL1O95470 568 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 GRB14Q14449 540 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 PPP4R3BQ5MIZ7 849 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 SHCBP1Q8NEM2 672 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 MKL1Q969V6 931 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 DEFB118Q96PH6 123 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 NUP88Q99567 741 aaPredicted RBP19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 PPP1R9AQ9ULJ8 1098 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 COL11A1P12107 1806 aaPredicted RBP19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 ZMYM6O95789 1325 aa19.96■□□□□ 0.79
NOTCH3-205ENST00000600841 TSPY2A6NKD2 308 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 ERCC3P19447 782 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 PDE4AP27815 886 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 TRIM32Q13049 653 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 CWC27Q6UX04 472 aaKnown RBP19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 LRRC47Q8N1G4 583 aaKnown RBP19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 MROH8Q9H579 483 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 HMX1Q9NP08 348 aaPredicted RBP19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 ADAMTS5Q9UNA0 930 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 RPTORQ8N122 1335 aa19.95■□□□□ 0.78
NOTCH3-205ENST00000600841 VWA5AO00534 786 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 STRNO43815 780 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 ORC4O43929 436 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 RANBP6O60518 1105 aaKnown RBP19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 PRKAR2AP13861 404 aaKnown RBP19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 CAPN2P17655 700 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 TMEM132BQ14DG7 1078 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 NCAPG2Q86XI2 1143 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 GMCL1P1Q8NEA9 526 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 SLF1Q9BQI6 1058 aa19.94■□□□□ 0.78
NOTCH3-205ENST00000600841 TFRCP02786 760 aaKnown RBP19.93■□□□□ 0.78
NOTCH3-205ENST00000600841 CCL14Q16627 93 aa19.93■□□□□ 0.78
NOTCH3-205ENST00000600841 MAP3K21Q5TCX8 1036 aa19.93■□□□□ 0.78
NOTCH3-205ENST00000600841 PRPF38BQ5VTL8 546 aaKnown RBP19.93■□□□□ 0.78
NOTCH3-205ENST00000600841 TOMM22Q9NS69 142 aa19.93■□□□□ 0.78
NOTCH3-205ENST00000600841 ZNF236Q9UL36 1845 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 SLC25A27O95847 323 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 HOXC6P09630 235 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 FGRP09769 529 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 TTC22Q5TAA0 569 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 SLFN13Q68D06 897 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 DPP9Q86TI2 863 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 CRISPLD2Q9H0B8 497 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 STX8Q9UNK0 236 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 TACC3Q9Y6A5 838 aa19.92■□□□□ 0.78
NOTCH3-205ENST00000600841 FARP2O94887 1054 aaPredicted RBP19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 ADORA2AP29274 412 aa19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 STAT3P40763 770 aa19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 HAND2P61296 217 aa19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 CACNB2Q08289 660 aaPredicted RBP19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 MFSD14CQ5VZR4 134 aa19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 PRPF38AQ8NAV1 312 aaKnown RBP19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 FEM1BQ9UK73 627 aa19.91■□□□□ 0.78
NOTCH3-205ENST00000600841 ZNFX1Q9P2E3 1918 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 PCP11498 1178 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 COPB2P35606 906 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 UBE2Q1Q7Z7E8 422 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 RIOX2Q8IUF8 465 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 ABRAQ8N0Z2 381 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 REPS2Q8NFH8 660 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 NPLOC4Q8TAT6 608 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 IL17RBQ9NRM6 502 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 SLC5A4Q9NY91 659 aa19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 ZNF214Q9UL59 606 aaPredicted RBP19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 ISY1Q9ULR0 285 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 CTDP1Q9Y5B0 961 aaPredicted RBP19.9■□□□□ 0.78
NOTCH3-205ENST00000600841 NMT2O60551 498 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 FCER1AP12319 257 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 BMP3P12645 472 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 GSPT1P15170 499 aaKnown RBP19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 MFSD6Q6ZSS7 791 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 KIFC2Q96AC6 838 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 GMCL1Q96IK5 515 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 TEX13BQ9BXU2 312 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 RNF41Q9H4P4 317 aaPredicted RBP19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 FLRT1Q9NZU1 646 aa19.89■□□□□ 0.77
NOTCH3-205ENST00000600841 ZNF213O14771 459 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 ZBED4O75132 1171 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 AKNAD1Q5T1N1 836 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 STAG1Q8WVM7 1258 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 MMP19Q99542 508 aa19.88■□□□□ 0.77
NOTCH3-205ENST00000600841 NBPF3Q9H094 633 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms