RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TREML2Q5T2D2 321 aa14.78□□□□□ -0.04
CHMP2A-206ENST00000600118 NUP88Q99567 741 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-206ENST00000600118 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-206ENST00000600118 RPAP3Q9H6T3 665 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-206ENST00000600118 AGTPBP1Q9UPW5 1226 aa14.78□□□□□ -0.04
CHMP2A-206ENST00000600118 PALM3A6NDB9 673 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 GOLGA8BA8MQT2 603 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 BTBD19C9JJ37 291 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 AOC2O75106 756 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 RXRAP19793 462 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 TM4SF4P48230 202 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 KIF23Q02241 960 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 FAM83BQ5T0W9 1011 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 SYNE3Q6ZMZ3 975 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 GADL1Q6ZQY3 521 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 ANKRD23Q86SG2 305 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 MICU3Q86XE3 530 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 FANCBQ8NB91 859 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 NUP133Q8WUM0 1156 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 FAM217BQ9NTX9 383 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 LIMCH1Q9UPQ0 1083 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 MTMR7Q9Y216 660 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 SLC45A1Q9Y2W3 748 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 LOC285556D6RIA3 1793 aa14.77□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L15C9J2P7 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L13C9JLJ4 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L11C9JVI0 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L18D6R9N7 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L22D6RA61 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L17D6RBQ6 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L19D6RCP7 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L20D6RJB6 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 RAD21O60216 631 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 PLA2G6O60733 806 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 PARP1P09874 1014 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 MAP2K2P36507 400 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 MCM2P49736 904 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 USP17L24Q0WX57 530 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 SREBF2Q12772 1141 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 GRM1Q13255 1194 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 ME3Q16798 604 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 BTNL9Q6UXG8 535 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 CATSPERGQ6ZRH7 1159 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 KCTD1Q719H9 257 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 FAM43AQ8N2R8 423 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 PTPRFP10586 1907 aa14.76□□□□□ -0.05
CHMP2A-206ENST00000600118 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 MYH4Q9Y623 1939 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 IGF2BP3O00425 579 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 PFKFB2O60825 505 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 LARGE1O95461 756 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 GOLGA8HP0CJ92 632 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 KIF5BP33176 963 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 PPP2R5BQ15173 497 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 SLC35G1Q2M3R5 365 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 TTBK2Q6IQ55 1244 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 IFNL1Q8IU54 200 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 STAG2Q8N3U4 1231 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 SNX21Q969T3 373 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 FBXO28Q9NVF7 368 aa14.75□□□□□ -0.05
CHMP2A-206ENST00000600118 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 MYPNQ86TC9 1320 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 CDC27P30260 824 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 GNAQP50148 359 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 FUT2Q10981 343 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.051e-9■■■□□ 18.7
CHMP2A-206ENST00000600118 RTN1Q16799 776 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 TMTC3Q6ZXV5 915 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 FAM160B2Q86V87 743 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 DNAJC5GQ8N7S2 189 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 ASCC2Q9H1I8 757 aaPredicted RBP14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 RBM28Q9NW13 759 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 FEM1BQ9UK73 627 aa14.74□□□□□ -0.05
CHMP2A-206ENST00000600118 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 PDHXO00330 501 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 PLEKHA8P1O95397 391 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 STAT2P52630 851 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 SCRN1Q12765 414 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 COG2Q14746 738 aa14.73□□□□□ -0.05
CHMP2A-206ENST00000600118 NTRK3Q16288 839 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms