RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 USP17L18D6R9N7 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L22D6RA61 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L17D6RBQ6 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L19D6RCP7 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L20D6RJB6 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 CA12O43570 354 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 CYP2C8P10632 490 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L24Q0WX57 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 CRHR2Q13324 411 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 IFIT1BQ5T764 474 aaKnown RBP25.71■■□□□ 1.71
LTBP4-227ENST00000600026 TCEANC2Q96MN5 208 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 ALDH8A1Q9H2A2 487 aaPredicted RBP25.71■■□□□ 1.71
LTBP4-227ENST00000600026 OSBPP22059 807 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 ANKRD1Q15327 319 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 TMEM67Q5HYA8 995 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 FAM83BQ5T0W9 1011 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 CATSPERGQ6ZRH7 1159 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 Q6ZUG5 572 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 RASGRP2Q7LDG7 609 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 NUP88Q99567 741 aaPredicted RBP25.7■■□□□ 1.7
LTBP4-227ENST00000600026 CFHR5Q9BXR6 569 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 LRRC2Q9BYS8 371 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 TANGO6Q9C0B7 1094 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 ASCC2Q9H1I8 757 aaPredicted RBP25.7■■□□□ 1.7
LTBP4-227ENST00000600026 KAT14Q9H8E8 782 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 ZFYVE28Q9HCC9 887 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 MTMR7Q9Y216 660 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 A0A0G2JMZ2 1700 aa25.7■■□□□ 1.7
LTBP4-227ENST00000600026 ADGRA2Q96PE1 1338 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 TBC1D8O95759 1140 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 IRX3P78415 501 aaPredicted RBP25.69■■□□□ 1.7
LTBP4-227ENST00000600026 WTAPQ15007 396 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 PNMA1Q8ND90 353 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 IGDCC4Q8TDY8 1250 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 R3HDMLQ9H3Y0 253 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 SENP2Q9HC62 589 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 TSKSQ9UJT2 592 aa25.69■■□□□ 1.7
LTBP4-227ENST00000600026 SH2B2O14492 632 aaPredicted RBP25.68■■□□□ 1.7
LTBP4-227ENST00000600026 TMTC2Q8N394 836 aa25.68■■□□□ 1.7
LTBP4-227ENST00000600026 CHMP4CQ96CF2 233 aa25.68■■□□□ 1.7
LTBP4-227ENST00000600026 LY9Q9HBG7 655 aa25.68■■□□□ 1.7
LTBP4-227ENST00000600026 GPHNQ9NQX3 736 aaPredicted RBP25.68■■□□□ 1.7
LTBP4-227ENST00000600026 BMP3P12645 472 aa25.67■■□□□ 1.7
LTBP4-227ENST00000600026 FBXL16Q8N461 479 aa25.67■■□□□ 1.7
LTBP4-227ENST00000600026 DCAF4Q8WV16 495 aa25.67■■□□□ 1.7
LTBP4-227ENST00000600026 GMCL1Q96IK5 515 aa25.67■■□□□ 1.7
LTBP4-227ENST00000600026 COL11A1P12107 1806 aaPredicted RBP25.67■■□□□ 1.7
LTBP4-227ENST00000600026 LIFRP42702 1097 aa25.66■■□□□ 1.7
LTBP4-227ENST00000600026 SLC1A4P43007 532 aa25.66■■□□□ 1.7
LTBP4-227ENST00000600026 AK2P54819 239 aa25.66■■□□□ 1.7
LTBP4-227ENST00000600026 SMCR8Q8TEV9 937 aaPredicted RBP25.66■■□□□ 1.7
LTBP4-227ENST00000600026 TLR2O60603 784 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 FLOT1O75955 427 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 PDHBP11177 359 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 MCM2P49736 904 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 HERVK_113P62684 666 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 NFXL1Q6ZNB6 911 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 BRF1Q92994 677 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 P2RX7Q99572 595 aaKnown RBP25.65■■□□□ 1.7
LTBP4-227ENST00000600026 AGXT2Q9BYV1 514 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 FBXO28Q9NVF7 368 aa25.65■■□□□ 1.7
LTBP4-227ENST00000600026 ISY1Q9ULR0 285 aaKnown RBP25.65■■□□□ 1.7
LTBP4-227ENST00000600026 CCDC69A6NI79 296 aa25.64■■□□□ 1.7
LTBP4-227ENST00000600026 SNHG28P0DPA3 235 aa25.64■■□□□ 1.7
LTBP4-227ENST00000600026 TOB2Q14106 344 aaPredicted RBP25.64■■□□□ 1.7
LTBP4-227ENST00000600026 CCDC96Q2M329 555 aa25.64■■□□□ 1.7
LTBP4-227ENST00000600026 SPDYE16A6NNV3 312 aaPredicted RBP25.63■■□□□ 1.69
LTBP4-227ENST00000600026 COG2Q14746 738 aa25.63■■□□□ 1.69
LTBP4-227ENST00000600026 KCTD1Q719H9 257 aa25.63■■□□□ 1.69
LTBP4-227ENST00000600026 CPA4Q9UI42 421 aa25.63■■□□□ 1.69
LTBP4-227ENST00000600026 FRMPD2Q68DX3 1309 aaPredicted RBP25.63■■□□□ 1.69
LTBP4-227ENST00000600026 MYPNQ86TC9 1320 aa25.63■■□□□ 1.69
LTBP4-227ENST00000600026 DSG3P32926 999 aa25.62■■□□□ 1.69
LTBP4-227ENST00000600026 ANP32AP39687 249 aaKnown RBP25.62■■□□□ 1.69
LTBP4-227ENST00000600026 C17orf99Q6UX52 265 aa25.62■■□□□ 1.69
LTBP4-227ENST00000600026 SYNE3Q6ZMZ3 975 aa25.62■■□□□ 1.69
LTBP4-227ENST00000600026 SGMS1Q86VZ5 419 aa25.62■■□□□ 1.69
LTBP4-227ENST00000600026 RBM19Q9Y4C8 960 aaKnown RBP25.62■■□□□ 1.69
LTBP4-227ENST00000600026 ZSWIM8A7E2V4 1837 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 TMEM232C9JQI7 657 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 BCRP11274 1271 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 ZNF543Q08ER8 600 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 APOBRQ0VD83 1088 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 SAMD1Q6SPF0 538 aaPredicted RBP25.61■■□□□ 1.69
LTBP4-227ENST00000600026 NOL8Q76FK4 1167 aaKnown RBP25.61■■□□□ 1.69
LTBP4-227ENST00000600026 GTF3C2Q8WUA4 911 aaPredicted RBP25.61■■□□□ 1.69
LTBP4-227ENST00000600026 ATG4CQ96DT6 458 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 SLF1Q9BQI6 1058 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 FEM1BQ9UK73 627 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 PPP1R9AQ9ULJ8 1098 aa25.61■■□□□ 1.69
LTBP4-227ENST00000600026 MGAMO43451 1857 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 GPR25O00155 361 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 GCLCP48506 637 aaPredicted RBP25.6■■□□□ 1.69
LTBP4-227ENST00000600026 POTEEQ6S8J3 1075 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 LBX2Q6XYB7 198 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 CATIPQ7Z7H3 387 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 HSCBQ8IWL3 235 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 ZNF654Q8IZM8 581 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 SNX21Q969T3 373 aa25.6■■□□□ 1.69
LTBP4-227ENST00000600026 GPCPD1Q9NPB8 672 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms