RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 HOXC10Q9NYD6 342 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 SH2B2O14492 632 aaPredicted RBP9.79□□□□□ -0.84
VRK3-211ENST00000596445 TLR2O60603 784 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 PLA2G6O60733 806 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 FLOT1O75955 427 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 SNHG28P0DPA3 235 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 PDHBP11177 359 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 BMP3P12645 472 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 RPS6KB1P23443 525 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 SLC1A4P43007 532 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 GCLCP48506 637 aaPredicted RBP9.79□□□□□ -0.84
VRK3-211ENST00000596445 HERVK_113P62684 666 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 COG2Q14746 738 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 RUFY3Q7L099 469 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 FBXL16Q8N461 479 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 SMCR8Q8TEV9 937 aaPredicted RBP9.79□□□□□ -0.84
VRK3-211ENST00000596445 P2RX7Q99572 595 aaKnown RBP9.79□□□□□ -0.84
VRK3-211ENST00000596445 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 R3HDMLQ9H3Y0 253 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
VRK3-211ENST00000596445 FEM1BQ9UK73 627 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 MTMR7Q9Y216 660 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 CYP46A1Q9Y6A2 500 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 MYPNQ86TC9 1320 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 ADGRA2Q96PE1 1338 aa9.79□□□□□ -0.84
VRK3-211ENST00000596445 COL11A1P12107 1806 aaPredicted RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 CCDC69A6NI79 296 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 HSPA1AP0DMV8 641 aaKnown RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 HSPA1BP0DMV9 641 aaKnown RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 CPA1P15085 419 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 DSG3P32926 999 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 STAT2P52630 851 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 CCDC96Q2M329 555 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 LBX2Q6XYB7 198 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 KCTD1Q719H9 257 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 CATIPQ7Z7H3 387 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 GTF3C2Q8WUA4 911 aaPredicted RBP9.78□□□□□ -0.84
VRK3-211ENST00000596445 CHURC1Q8WUH1 139 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 TCEANC2Q96MN5 208 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 FBXO28Q9NVF7 368 aa9.78□□□□□ -0.84
VRK3-211ENST00000596445 A0A0G2JMZ2 1700 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
VRK3-211ENST00000596445 TMEM232C9JQI7 657 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 FOXN1O15353 648 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 DDAH1O94760 285 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 BCRP11274 1271 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 FGD1P98174 961 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 ZNF543Q08ER8 600 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 TROAPQ12815 778 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 ASPRV1Q53RT3 343 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
VRK3-211ENST00000596445 C17orf99Q6UX52 265 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 Q6ZUG5 572 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 FAM160B2Q86V87 743 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 ZNF654Q8IZM8 581 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 MB21D1Q8N884 522 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 CHMP4CQ96CF2 233 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 MAP3K14Q99558 947 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 SLF1Q9BQI6 1058 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 UPF3BQ9BZI7 483 aaKnown RBP9.77□□□□□ -0.85
VRK3-211ENST00000596445 CPA4Q9UI42 421 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 TSKSQ9UJT2 592 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
VRK3-211ENST00000596445 ADAMTS5Q9UNA0 930 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 SLC12A7Q9Y666 1083 aa9.77□□□□□ -0.85
VRK3-211ENST00000596445 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 GPR25O00155 361 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 VWA5AO00534 786 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 FDX1P10109 184 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 HSPA8P11142 646 aaKnown RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 IKQ13123 557 aaPredicted RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 GRM4Q14833 912 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 FAM110CQ1W6H9 321 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 POTEEQ6S8J3 1075 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 BTNL9Q6UXG8 535 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 SYNE3Q6ZMZ3 975 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 KIFC2Q96AC6 838 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 ATG4CQ96DT6 458 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 KIF2CQ99661 725 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 ALDH8A1Q9H2A2 487 aaPredicted RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 RBPJLQ9UBG7 517 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms