RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ANO1Q5XXA6 986 aa20.36■□□□□ 0.85
CCDC9-202ENST00000595659 BAZ2AQ9UIF9 1905 aaKnown RBP20.35■□□□□ 0.85
CCDC9-202ENST00000595659 COL6A1P12109 1028 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 GNAT2P19087 354 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 MX1P20591 662 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 LRRC26Q2I0M4 334 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 IFNL3Q8IZI9 196 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-202ENST00000595659 CLIP2Q9UDT6 1046 aa20.35■□□□□ 0.85
CCDC9-202ENST00000595659 F5H6K3 240 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 VWA5AO00534 786 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 IGHA2P01877 340 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 CYBAP13498 195 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 KLRC3Q07444 240 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 LRRFIP1Q32MZ4 808 aaKnown RBP20.34■□□□□ 0.85
CCDC9-202ENST00000595659 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
CCDC9-202ENST00000595659 PPP1R9AQ9ULJ8 1098 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 ADAMTS5Q9UNA0 930 aa20.34■□□□□ 0.85
CCDC9-202ENST00000595659 NDUFB10O96000 172 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 PGK2P07205 417 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 FCER1AP12319 257 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 STAT3P40763 770 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 ZMYM1Q5SVZ6 1142 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 OLFML2BQ68BL8 750 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 CCDC129Q6ZRS4 1044 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 MMP19Q99542 508 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 NYAP2Q9P242 653 aa20.33■□□□□ 0.85
CCDC9-202ENST00000595659 ZBTB47Q9UFB7 747 aaPredicted RBP20.33■□□□□ 0.85
CCDC9-202ENST00000595659 CEP290O15078 2479 aa20.33■□□□□ 0.84
CCDC9-202ENST00000595659 SLC25A27O95847 323 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 MYCNP04198 464 aaPredicted RBP20.32■□□□□ 0.84
CCDC9-202ENST00000595659 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 ATN1P54259 1190 aaPredicted RBP20.32■□□□□ 0.84
CCDC9-202ENST00000595659 FAM47AQ5JRC9 791 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 REPS2Q8NFH8 660 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 CHMP4CQ96CF2 233 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 CEP95Q96GE4 821 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 MAML3Q96JK9 1138 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 GDF15Q99988 308 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 NACAP1Q9BZK3 213 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 SLC5A4Q9NY91 659 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 ROBO3Q96MS0 1386 aa20.32■□□□□ 0.84
CCDC9-202ENST00000595659 IGKV6D-41A0A0C4DH26 115 aa20.31■□□□□ 0.84
CCDC9-202ENST00000595659 SOX1O00570 391 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-202ENST00000595659 MAGEA10P43363 369 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-202ENST00000595659 GJC2Q5T442 439 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-202ENST00000595659 RIOX2Q8IUF8 465 aa20.31■□□□□ 0.84
CCDC9-202ENST00000595659 ABRAQ8N0Z2 381 aa20.31■□□□□ 0.84
CCDC9-202ENST00000595659 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
CCDC9-202ENST00000595659 SLF1Q9BQI6 1058 aa20.31■□□□□ 0.84
CCDC9-202ENST00000595659 NAPBQ9H115 298 aa20.31■□□□□ 0.84
CCDC9-202ENST00000595659 ZNF214Q9UL59 606 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-202ENST00000595659 RANBP2P49792 3224 aaKnown RBP20.3■□□□□ 0.84
CCDC9-202ENST00000595659 MSCO60682 206 aa20.3■□□□□ 0.84
CCDC9-202ENST00000595659 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
CCDC9-202ENST00000595659 INCENPQ9NQS7 918 aa20.3■□□□□ 0.84
CCDC9-202ENST00000595659 MTMR4Q9NYA4 1195 aa20.3■□□□□ 0.84
CCDC9-202ENST00000595659 SALL3Q9BXA9 1300 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 PPARAQ07869 468 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 KCTD2Q14681 263 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 LRCH3Q96II8 777 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 RIPK3Q9Y572 518 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 TRIOBPQ9H2D6 2365 aa20.29■□□□□ 0.84
CCDC9-202ENST00000595659 RLFQ13129 1914 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 DNM1LO00429 736 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 SEPT4O43236 478 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 TSPY3P0CV98 308 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 TSPY8P0CW00 308 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 TFAP4Q01664 338 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 SNRNP48Q6IEG0 339 aaKnown RBP20.28■□□□□ 0.84
CCDC9-202ENST00000595659 CPXCR1Q8N123 301 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 KIFC2Q96AC6 838 aa20.28■□□□□ 0.84
CCDC9-202ENST00000595659 ISY1Q9ULR0 285 aaKnown RBP20.28■□□□□ 0.84
CCDC9-202ENST00000595659 FOXP2O15409 715 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 TTLL1O95922 423 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 TAL1P17542 331 aaPredicted RBP20.27■□□□□ 0.84
CCDC9-202ENST00000595659 MDM2Q00987 491 aaPredicted RBP20.27■□□□□ 0.84
CCDC9-202ENST00000595659 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 PDE4BQ07343 736 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 VPS53Q5VIR6 699 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.84
CCDC9-202ENST00000595659 NEDD1Q8NHV4 660 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 MYH7P12883 1935 aa20.27■□□□□ 0.84
CCDC9-202ENST00000595659 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.83
CCDC9-202ENST00000595659 A0A1W2PPC1 479 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 ZBED4O75132 1171 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 SLC3A2P08195 630 aaKnown RBP20.26■□□□□ 0.83
CCDC9-202ENST00000595659 BMP8BP34820 402 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 PDE1AP54750 535 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
CCDC9-202ENST00000595659 ZNF792Q3KQV3 632 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 ARRDC4Q8NCT1 418 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 MKL1Q969V6 931 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 TINF2Q9BSI4 451 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 TEX13BQ9BXU2 312 aa20.26■□□□□ 0.83
CCDC9-202ENST00000595659 UBE2OQ9C0C9 1292 aaKnown RBP20.26■□□□□ 0.83
CCDC9-202ENST00000595659 RAVER2Q9HCJ3 691 aaKnown RBP20.26■□□□□ 0.83
CCDC9-202ENST00000595659 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
CCDC9-202ENST00000595659 ALPK3Q96L96 1907 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms