RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 PNKPQ96T60 521 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 ANKZF1Q9H8Y5 726 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 CEP131Q9UPN4 1083 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 CTNND2Q9UQB3 1225 aa17.37■□□□□ 0.37
ZNF541-205ENST00000595558 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 CCDC196A0A1B0GTZ2 297 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 MFAP3LO75121 409 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 SLC44A5Q8NCS7 719 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
ZNF541-205ENST00000595558 PHF20Q9BVI0 1012 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 GNAT2P19087 354 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
ZNF541-205ENST00000595558 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 LRRC4BQ9NT99 713 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 USP21Q9UK80 565 aa17.36■□□□□ 0.37
ZNF541-205ENST00000595558 KRT2P35908 639 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 NPY5RQ15761 445 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 ESR2Q92731 530 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 MTRQ99707 1265 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 ERVK-24P63145 666 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
ZNF541-205ENST00000595558 SLC35F6Q8N357 371 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 RNF26Q9BY78 433 aaPredicted RBP17.35■□□□□ 0.37
ZNF541-205ENST00000595558 VPS16Q9H269 839 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 DCP1AQ9NPI6 582 aaPredicted RBP17.35■□□□□ 0.37
ZNF541-205ENST00000595558 XDHP47989 1333 aa17.35■□□□□ 0.37
ZNF541-205ENST00000595558 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 PTGDRQ13258 359 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 IL17AQ16552 155 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 COL22A1Q8NFW1 1626 aaPredicted RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 MCM9Q9NXL9 1143 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 MYH13Q9UKX3 1938 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 ATP8B1O43520 1251 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 KIF5CO60282 957 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 KRT31Q15323 416 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 TPTE2Q6XPS3 522 aa17.34■□□□□ 0.37
ZNF541-205ENST00000595558 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 RNF41Q9H4P4 317 aaPredicted RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
ZNF541-205ENST00000595558 MYH6P13533 1939 aa17.33■□□□□ 0.37
ZNF541-205ENST00000595558 TOM1O60784 492 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 RHOXF2BP0C7M4 288 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 TROAPQ12815 778 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 MCM6Q14566 821 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 RHOXF2Q9BQY4 288 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 TAB2Q9NYJ8 693 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 CALCOCO1Q9P1Z2 691 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 CDC23Q9UJX2 597 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 TNFRSF25Q93038 417 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 TFR2Q9UP52 801 aa17.33■□□□□ 0.36
ZNF541-205ENST00000595558 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
ZNF541-205ENST00000595558 RFC4P35249 363 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 FAM193AP78312 1265 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 RRAGBQ5VZM2 374 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 RASGRP4Q8TDF6 673 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 CACNA1SQ13698 1873 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 N4BP3O15049 544 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 CAPN2P17655 700 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 VPS72Q15906 364 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 E2F4Q16254 413 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 SLC10A5Q5PT55 438 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 BEND6Q5SZJ8 279 aaPredicted RBP17.32■□□□□ 0.36
ZNF541-205ENST00000595558 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
ZNF541-205ENST00000595558 GPKOWQ92917 476 aaPredicted RBP eCLIP17.32■□□□□ 0.36
ZNF541-205ENST00000595558 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 PDE11AQ9HCR9 933 aa17.32■□□□□ 0.36
ZNF541-205ENST00000595558 CCDC151A5D8V7 595 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 PRPF3O43395 683 aaKnown RBP17.31■□□□□ 0.36
ZNF541-205ENST00000595558 ARHGAP25P42331 645 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 STAG2Q8N3U4 1231 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 CHP1Q99653 195 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 MAP2K7O14733 419 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 MCM7P33993 719 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 ABHD10Q9NUJ1 306 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 TMEM51Q9NW97 253 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms