RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 CLIC4Q9Y696 253 aa17.51■□□□□ 0.39
PNKP-204ENST00000594661 TUBB4AP04350 444 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 PLCG2P16885 1265 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 TROAPQ12815 778 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
PNKP-204ENST00000594661 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 GPATCH11Q8N954 259 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 KCNQ5Q9NR82 932 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■■□□□ 13.1
PNKP-204ENST00000594661 ADAMTSL1Q8N6G6 1762 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 G3V3G9 751 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
PNKP-204ENST00000594661 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
PNKP-204ENST00000594661 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
PNKP-204ENST00000594661 RPS6KA5O75582 802 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 TFAP4Q01664 338 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 EP400NLQ6ZTU2 488 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 TRIM22Q8IYM9 498 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 CXorf56Q9H5V9 222 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
PNKP-204ENST00000594661 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
PNKP-204ENST00000594661 DDAH1O94760 285 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 PLEKHA8P1O95397 391 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 YEATS4O95619 227 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 CAVIN2O95810 425 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
PNKP-204ENST00000594661 SMC1AQ14683 1233 aaKnown RBP17.48■□□□□ 0.39
PNKP-204ENST00000594661 KCNG4Q8TDN1 519 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 C7orf43Q8WVR3 580 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 CTAGE5O15320 804 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 DEXIO95424 95 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 CPP00450 1065 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 SCNN1DP51172 638 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 FUT2Q10981 343 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 TRIM29Q14134 588 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 PPP2R5BQ15173 497 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
PNKP-204ENST00000594661 PPM1EQ8WY54 764 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
PNKP-204ENST00000594661 WASF1Q92558 559 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 MYH1P12882 1939 aa17.48■□□□□ 0.39
PNKP-204ENST00000594661 TPM1P09493 284 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 SATB1Q01826 763 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 GNL2Q13823 731 aaKnown RBP17.47■□□□□ 0.39
PNKP-204ENST00000594661 PODNQ7Z5L7 613 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 MNS1Q8NEH6 495 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 ZCCHC17Q9NP64 241 aaKnown RBP17.47■□□□□ 0.39
PNKP-204ENST00000594661 MED4Q9NPJ6 270 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 SCN9AQ15858 1988 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 SPTLC2O15270 562 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 SASH3O75995 380 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 CALM1P0DP23 149 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 CALM2P0DP24 149 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 CALM3P0DP25 149 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 RASA1P20936 1047 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 ANO1Q5XXA6 986 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
PNKP-204ENST00000594661 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
PNKP-204ENST00000594661 MYH6P13533 1939 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 A0A1W2PQ27 194 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 A0A1W2PQ64 194 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 A0A1W2PQD8 194 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 C16orf86Q6ZW13 317 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 CEP89Q96ST8 783 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 RNF26Q9BY78 433 aaPredicted RBP17.46■□□□□ 0.39
PNKP-204ENST00000594661 DNAJC25Q9H1X3 360 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
PNKP-204ENST00000594661 ADAM21Q9UKJ8 722 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 KCNJ14Q9UNX9 436 aa17.46■□□□□ 0.39
PNKP-204ENST00000594661 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
PNKP-204ENST00000594661 ECE2O60344 883 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 CDK8P49336 464 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 PICALMQ13492 652 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 UBXN4Q92575 508 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
PNKP-204ENST00000594661 A0A1B0GVL5 298 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 hCG_1642624A0A1W2PR95 340 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms