RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
PRKCSH-220ENST00000593104 MYH7P12883 1935 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 USP17L12C9JPN9 530 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 USP17L21D6R901 530 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 STRNO43815 780 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 TLE2Q04725 743 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 ARRDC4Q8NCT1 418 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 SHCBP1Q8NEM2 672 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 TTYH1Q9H313 450 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 ARHGEF10LQ9HCE6 1279 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
PRKCSH-220ENST00000593104 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 SNX17Q15036 470 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 C12orf60Q5U649 245 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 MMP19Q99542 508 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 PUS7LQ9H0K6 701 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 MROH8Q9H579 483 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 SWAP70Q9UH65 585 aa13.52□□□□□ -0.25
PRKCSH-220ENST00000593104 PQBP1O60828 265 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 FCER1AP12319 257 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 CTR9Q6PD62 1173 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 C16orf86Q6ZW13 317 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 REPS2Q8NFH8 660 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 SEMA6BQ9H3T3 888 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
PRKCSH-220ENST00000593104 MYADML2A6NDP7 307 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 ZNF865P0CJ78 1059 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 ZNF214Q9UL59 606 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 RIPK3Q9Y572 518 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 MCM3APO60318 1980 aa13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-220ENST00000593104 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 VWA5AO00534 786 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 RARBP10826 455 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 STAT3P40763 770 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 ABRAQ8N0Z2 381 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 HAUS7Q99871 368 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 SLC5A4Q9NY91 659 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 PHF24Q9UPV7 400 aa13.49□□□□□ -0.25
PRKCSH-220ENST00000593104 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 ADCY6O43306 1168 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 CLTBP09497 229 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 ATP5JP18859 108 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 KCTD2Q14681 263 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 RNPC3Q96LT9 517 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 LAMA2P24043 3122 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-220ENST00000593104 ADAMTS4O75173 837 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 SLC25A27O95847 323 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 PTGS1P23219 599 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 RPAP2Q8IXW5 612 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 CPXCR1Q8N123 301 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 SH2D4AQ9H788 454 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 A0A0C4DFX4 3053 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
PRKCSH-220ENST00000593104 SYNRGQ9UMZ2 1314 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 PRDM1O75626 825 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 NDUFB10O96000 172 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 RAG1P15918 1043 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 RASA1P20936 1047 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 UBE3CQ15386 1083 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 SNRNP48Q6IEG0 339 aaKnown RBP13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 FGD4Q96M96 766 aa13.46□□□□□ -0.25
PRKCSH-220ENST00000593104 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.253e-6■□□□□ 9
PRKCSH-220ENST00000593104 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms