RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 SPICE1Q8N0Z3 855 aa29.68■■■□□ 2.34
LDLRAD4-218ENST00000592991 CHAMP1Q96JM3 812 aa29.68■■■□□ 2.34
LDLRAD4-218ENST00000592991 RNF26Q9BY78 433 aaPredicted RBP29.68■■■□□ 2.34
LDLRAD4-218ENST00000592991 UBA5Q9GZZ9 404 aa29.68■■■□□ 2.34
LDLRAD4-218ENST00000592991 KIF3AQ9Y496 699 aa29.68■■■□□ 2.34
LDLRAD4-218ENST00000592991 TRAF5O00463 557 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 ZSCAN22P10073 491 aaPredicted RBP29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 TMX2Q9Y320 296 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 H3BQV1 296 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 GNAQP50148 359 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 PKN1Q16512 942 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 IFFO2Q5TF58 517 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 MOB2Q70IA6 237 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 GMCL1P1Q8NEA9 526 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 C8orf76Q96K31 380 aa29.67■■■□□ 2.34
LDLRAD4-218ENST00000592991 PRPF3O43395 683 aaKnown RBP29.66■■■□□ 2.34
LDLRAD4-218ENST00000592991 ASPRV1Q53RT3 343 aa29.66■■■□□ 2.34
LDLRAD4-218ENST00000592991 FERMT3Q86UX7 667 aa29.66■■■□□ 2.34
LDLRAD4-218ENST00000592991 DEXIO95424 95 aa29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 SLC1A4P43007 532 aa29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 AKAP17AQ02040 695 aaKnown RBP29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 FOXD4L6Q3SYB3 417 aaPredicted RBP29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 FOXD4L3Q6VB84 417 aaPredicted RBP29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 PHIPQ8WWQ0 1821 aa29.65■■■□□ 2.34
LDLRAD4-218ENST00000592991 DGKZQ13574 1117 aa29.64■■■□□ 2.34
LDLRAD4-218ENST00000592991 DCAF4Q8WV16 495 aa29.64■■■□□ 2.34
LDLRAD4-218ENST00000592991 FEZ1Q99689 392 aa29.64■■■□□ 2.34
LDLRAD4-218ENST00000592991 VAT1LQ9HCJ6 419 aa29.64■■■□□ 2.34
LDLRAD4-218ENST00000592991 PICK1Q9NRD5 415 aa29.64■■■□□ 2.34
LDLRAD4-218ENST00000592991 SLC16A2P36021 539 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 SHISA4Q96DD7 197 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 GINM1Q9NU53 330 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 PPP1R12BO60237 982 aaPredicted RBP29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 F13A1P00488 732 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 PTPRAP18433 802 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 LZTS2Q9BRK4 669 aa29.63■■■□□ 2.33
LDLRAD4-218ENST00000592991 NF2P35240 595 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 VGLL4Q14135 290 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 TTLL12Q14166 644 aaPredicted RBP29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 GMCL1Q96IK5 515 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 SPZ1Q9BXG8 430 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 VCPKMTQ9H867 229 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 GOPCQ9HD26 462 aa29.62■■■□□ 2.33
LDLRAD4-218ENST00000592991 MAP3K9P80192 1104 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 NOL9Q5SY16 702 aaKnown RBP29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 LDHDQ86WU2 507 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 HOMER1Q86YM7 354 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 FBXO18Q8NFZ0 1043 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 WASF1Q92558 559 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 ZNF408Q9H9D4 720 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 VPS54Q9P1Q0 977 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 SNCAIPQ9Y6H5 919 aa29.61■■■□□ 2.33
LDLRAD4-218ENST00000592991 GPATCH4Q5T3I0 446 aaKnown RBP29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 KRT40Q6A162 431 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 SH2D4AQ9H788 454 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 SYNPO2Q9UMS6 1093 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 KCNJ14Q9UNX9 436 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 BMP3P12645 472 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 FAM83BQ5T0W9 1011 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 MCTP1Q6DN14 999 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 GPKOWQ92917 476 aaPredicted RBP eCLIP29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 PIGSQ96S52 555 aa29.6■■■□□ 2.33
LDLRAD4-218ENST00000592991 IREB2P48200 963 aaKnown RBP29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 SPP2Q13103 211 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 MTMR2Q13614 643 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 CNKSR2Q8WXI2 1034 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 CLMNQ96JQ2 1002 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 RIOX1Q9H6W3 641 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 ZHX2Q9Y6X8 837 aa29.59■■■□□ 2.33
LDLRAD4-218ENST00000592991 SCG2P13521 617 aa29.58■■■□□ 2.33
LDLRAD4-218ENST00000592991 RESTQ13127 1097 aa29.58■■■□□ 2.33
LDLRAD4-218ENST00000592991 PFKFB3Q16875 520 aaPredicted RBP29.58■■■□□ 2.33
LDLRAD4-218ENST00000592991 FAM173BQ6P4H8 233 aa29.58■■■□□ 2.33
LDLRAD4-218ENST00000592991 ADGRF4Q8IZF3 695 aa29.58■■■□□ 2.33
LDLRAD4-218ENST00000592991 TRIM75PA6NK02 468 aa29.57■■■□□ 2.32
LDLRAD4-218ENST00000592991 TMEM232C9JQI7 657 aa29.57■■■□□ 2.32
LDLRAD4-218ENST00000592991 USP17L10C9JJH3 530 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 TRIM29Q14134 588 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 KIAA1683Q9H0B3 1180 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 JMJD4Q9H9V9 463 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 CSADQ9Y600 493 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 IKQ13123 557 aaPredicted RBP29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 ZNF280CQ8ND82 737 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 RRP36Q96EU6 259 aaKnown RBP29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 WDR18Q9BV38 432 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 ELP3Q9H9T3 547 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 AS3MTQ9HBK9 375 aa29.56■■■□□ 2.32
LDLRAD4-218ENST00000592991 KIF28PB7ZC32 967 aa29.55■■■□□ 2.32
LDLRAD4-218ENST00000592991 BAG4O95429 457 aaKnown RBP29.55■■■□□ 2.32
LDLRAD4-218ENST00000592991 SMARCA1P28370 1054 aa29.55■■■□□ 2.32
LDLRAD4-218ENST00000592991 SNAP25P60880 206 aa29.55■■■□□ 2.32
LDLRAD4-218ENST00000592991 WWC2Q6AWC2 1192 aa29.55■■■□□ 2.32
LDLRAD4-218ENST00000592991 TCHHQ07283 1943 aa29.54■■■□□ 2.32
LDLRAD4-218ENST00000592991 PDIA4P13667 645 aaKnown RBP29.54■■■□□ 2.32
LDLRAD4-218ENST00000592991 TYW1BQ6NUM6 668 aa29.54■■■□□ 2.32
LDLRAD4-218ENST00000592991 HEATR3Q7Z4Q2 680 aa29.54■■■□□ 2.32
LDLRAD4-218ENST00000592991 ANP32EQ9BTT0 268 aa29.54■■■□□ 2.32
LDLRAD4-218ENST00000592991 EMILIN3Q9NT22 766 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms