RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 TTC14Q96N46 770 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 TMEM47Q9BQJ4 181 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 ZKSCAN3Q9BRR0 538 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 PORCNQ9H237 461 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 SRRDQ9UH36 339 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 GJD2Q9UKL4 321 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 GABRQQ9UN88 632 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 STX8Q9UNK0 236 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 CENPFP49454 3210 aa18.08■□□□□ 0.48
TRIM47-206ENST00000592942 FLOT1O75955 427 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 NT5C2P49902 561 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 FCGRTP55899 365 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 CYB5R4Q7L1T6 521 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 ATG4CQ96DT6 458 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 PAGR1Q9BTK6 254 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 MGAMO43451 1857 aa18.07■□□□□ 0.48
TRIM47-206ENST00000592942 MYPNQ86TC9 1320 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 E7EWF7 191 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 RAD21O60216 631 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 MCCP23508 829 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 REPS2Q8NFH8 660 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 GMCL1Q96IK5 515 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 KRT23Q9C075 422 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 PTCH2Q9Y6C5 1203 aa18.06■□□□□ 0.48
TRIM47-206ENST00000592942 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 SLC27A2O14975 620 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 TOP1P11387 765 aaKnown RBP18.05■□□□□ 0.48
TRIM47-206ENST00000592942 PRKCZQ05513 592 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 COL9A3Q14050 684 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-206ENST00000592942 DGKHQ86XP1 1220 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 CNNM2Q9H8M5 875 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 ANO2Q9NQ90 1003 aa18.05■□□□□ 0.48
TRIM47-206ENST00000592942 VWA5AO00534 786 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 TNPO2O14787 897 aaKnown RBP18.04■□□□□ 0.48
TRIM47-206ENST00000592942 BMP3P12645 472 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 HOXD10P28358 340 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 PRMT2P55345 433 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 SEC23AQ15436 765 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-206ENST00000592942 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
TRIM47-206ENST00000592942 ZSCAN10Q96SZ4 725 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-206ENST00000592942 FLT3LGP49771 235 aa18.03■□□□□ 0.48
TRIM47-206ENST00000592942 MB21D1Q8N884 522 aa18.03■□□□□ 0.48
TRIM47-206ENST00000592942 PRPF38AQ8NAV1 312 aaKnown RBP18.03■□□□□ 0.48
TRIM47-206ENST00000592942 SLF1Q9BQI6 1058 aa18.03■□□□□ 0.48
TRIM47-206ENST00000592942 MOV10L1Q9BXT6 1211 aaKnown RBP18.03■□□□□ 0.48
TRIM47-206ENST00000592942 SPATC1LQ9H0A9 340 aa18.03■□□□□ 0.48
TRIM47-206ENST00000592942 FEM1BQ9UK73 627 aa18.03■□□□□ 0.48
TRIM47-206ENST00000592942 A0A0G2JMZ2 1700 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 TMEM232C9JQI7 657 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 PLA2G6O60733 806 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 SNHG28P0DPA3 235 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 MAPK4P31152 587 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 SLC1A4P43007 532 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
TRIM47-206ENST00000592942 CASC1Q6TDU7 716 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 KCTD1Q719H9 257 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 IQCA1Q86XH1 822 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 MB21D2Q8IYB1 491 aaPredicted RBP18.02■□□□□ 0.48
TRIM47-206ENST00000592942 USP6NLQ92738 828 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 COA7Q96BR5 231 aa18.02■□□□□ 0.48
TRIM47-206ENST00000592942 ZNF214Q9UL59 606 aaPredicted RBP18.02■□□□□ 0.48
TRIM47-206ENST00000592942 PLXNB2O15031 1838 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 PDHBP11177 359 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 ANTXR2P58335 489 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 IRF5Q13568 498 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 CCDC178Q5BJE1 867 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 MORN1Q5T089 497 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 TTBK2Q6IQ55 1244 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 GPR142Q7Z601 462 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 DCAF4Q8WV16 495 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 ARMC5Q96C12 935 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 SENP2Q9HC62 589 aa18.01■□□□□ 0.47
TRIM47-206ENST00000592942 TNKSO95271 1327 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 CCNA1P78396 465 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 TRDNQ13061 729 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 BTNL9Q6UXG8 535 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 CHST3Q7LGC8 479 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 PLEKHH3Q7Z736 793 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 KCNB2Q92953 911 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 KIFC2Q96AC6 838 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 MTMR7Q9Y216 660 aa18■□□□□ 0.47
TRIM47-206ENST00000592942 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
TRIM47-206ENST00000592942 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 ERCC3P19447 782 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 PTPREP23469 700 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 RIOX2Q8IUF8 465 aa17.99■□□□□ 0.47
TRIM47-206ENST00000592942 PNMA1Q8ND90 353 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms