RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 GPR142Q7Z601 462 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 SKAP1Q86WV1 359 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 SOCS4Q8WXH5 440 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-217ENST00000592391 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 ADAMTS5Q9UNA0 930 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 STX8Q9UNK0 236 aa17.17■□□□□ 0.34
DDX39A-217ENST00000592391 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 SGSM2O43147 1006 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 NT5C2P49902 561 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
DDX39A-217ENST00000592391 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-217ENST00000592391 NUDT12Q9BQG2 462 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
DDX39A-217ENST00000592391 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
DDX39A-217ENST00000592391 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-217ENST00000592391 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 DOCK3Q8IZD9 2030 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 ELNP15502 786 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 UBXN2AP68543 259 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 SLFN13Q68D06 897 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 ESR2Q92731 530 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 MOV10L1Q9BXT6 1211 aaKnown RBP17.15■□□□□ 0.34
DDX39A-217ENST00000592391 NEDD4P46934 1319 aa17.15■□□□□ 0.34
DDX39A-217ENST00000592391 LAMA4Q16363 1823 aa17.14■□□□□ 0.34
DDX39A-217ENST00000592391 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 VWA5AO00534 786 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-217ENST00000592391 XRCC5P13010 732 aaKnown RBP17.14■□□□□ 0.33
DDX39A-217ENST00000592391 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 MTFR1Q15390 333 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 MORN1Q5T089 497 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 WDR78Q5VTH9 848 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
DDX39A-217ENST00000592391 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 USP6NLQ92738 828 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 FEM1BQ9UK73 627 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 PARP14Q460N5 1801 aa17.14■□□□□ 0.33
DDX39A-217ENST00000592391 PLXNB2O15031 1838 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 SLC15A5A6NIM6 579 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 INHAP05111 366 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 BMP3P12645 472 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 CYP2B6P20813 491 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 PTPREP23469 700 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 PTH1RQ03431 593 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 PLS1Q14651 629 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 IVNS1ABPQ9Y6Y0 642 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 BRCA2P51587 3418 aa17.13■□□□□ 0.33
DDX39A-217ENST00000592391 HMGCRP04035 888 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
DDX39A-217ENST00000592391 CCL5P13501 91 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 ERCC3P19447 782 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 RGS2P41220 211 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 SLC1A4P43007 532 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-217ENST00000592391 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 GRB14Q14449 540 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 TTC14Q96N46 770 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 MROH8Q9H579 483 aa17.12■□□□□ 0.33
DDX39A-217ENST00000592391 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-217ENST00000592391 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-217ENST00000592391 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
DDX39A-217ENST00000592391 STRNO43815 780 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 KDM4AO75164 1064 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 SLC25A27O95847 323 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 MCCP23508 829 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
DDX39A-217ENST00000592391 TRIB2Q92519 343 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 APBA2Q99767 749 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 CNNM2Q9H8M5 875 aa17.11■□□□□ 0.33
DDX39A-217ENST00000592391 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
DDX39A-217ENST00000592391 B4E1Z4 1266 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 EN2P19622 333 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-217ENST00000592391 STAT3P40763 770 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 STAT2P52630 851 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 IQCA1Q86XH1 822 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 MAP4K1Q92918 833 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 KRT23Q9C075 422 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
DDX39A-217ENST00000592391 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
DDX39A-217ENST00000592391 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms