RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
CLIP3-205ENST00000592017 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
CLIP3-205ENST00000592017 ATG4CQ96DT6 458 aa16.52■□□□□ 0.24
CLIP3-205ENST00000592017 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
CLIP3-205ENST00000592017 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
CLIP3-205ENST00000592017 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
CLIP3-205ENST00000592017 MYH8P13535 1937 aa16.52■□□□□ 0.23
CLIP3-205ENST00000592017 IGKV6D-41A0A0C4DH26 115 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 SLC15A5A6NIM6 579 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 TFAP4Q01664 338 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 GRB14Q14449 540 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
CLIP3-205ENST00000592017 APBA2Q99767 749 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 CEP290O15078 2479 aa16.51■□□□□ 0.23
CLIP3-205ENST00000592017 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 H0YGN5 161 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
CLIP3-205ENST00000592017 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 CEP95Q96GE4 821 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 IL25Q9H293 177 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 FLRT1Q9NZU1 646 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 ANAPC4Q9UJX5 808 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
CLIP3-205ENST00000592017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLIP3-205ENST00000592017 HOXC6P09630 235 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 CAPN2P17655 700 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 ERCC3P19447 782 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 CHMLP26374 656 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
CLIP3-205ENST00000592017 TMEM132BQ14DG7 1078 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 LRRC47Q8N1G4 583 aaKnown RBP16.49■□□□□ 0.23
CLIP3-205ENST00000592017 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 NPLOC4Q8TAT6 608 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
CLIP3-205ENST00000592017 DPF3Q92784 378 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
CLIP3-205ENST00000592017 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
CLIP3-205ENST00000592017 RAD50Q92878 1312 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 F5H6K3 240 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 NDUFB10O96000 172 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 IGHA2P01877 340 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
CLIP3-205ENST00000592017 KLRC3Q07444 240 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 PLS1Q14651 629 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 TBC1D10CQ8IV04 446 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 PAWRQ96IZ0 340 aaKnown RBP16.48■□□□□ 0.23
CLIP3-205ENST00000592017 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 MTMR4Q9NYA4 1195 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 IVNS1ABPQ9Y6Y0 642 aa16.48■□□□□ 0.23
CLIP3-205ENST00000592017 ZNF213O14771 459 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 COBLO75128 1261 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 SLC34A2O95436 690 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 TTLL1O95922 423 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 LHX8Q68G74 356 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 MKL1Q969V6 931 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 MROH8Q9H579 483 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 OGDHLQ9ULD0 1010 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
CLIP3-205ENST00000592017 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
CLIP3-205ENST00000592017 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
CLIP3-205ENST00000592017 VWA5AO00534 786 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 STRNO43815 780 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 ORC4O43929 436 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 NMT2O60551 498 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 ADORA2AP29274 412 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 MFSD14CQ5VZR4 134 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 NCAPG2Q86XI2 1143 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 CHMP4CQ96CF2 233 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 HTATIP2Q9BUP3 242 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
CLIP3-205ENST00000592017 NEDD4P46934 1319 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 CYP2C19P33261 490 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
CLIP3-205ENST00000592017 NECAB2Q7Z6G3 386 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 DPP9Q86TI2 863 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 ANKLE1Q8NAG6 615 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 TRPV1Q8NER1 839 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 STAG1Q8WVM7 1258 aa16.45■□□□□ 0.22
CLIP3-205ENST00000592017 RNF41Q9H4P4 317 aaPredicted RBP16.45■□□□□ 0.22
CLIP3-205ENST00000592017 CTNNA3Q9UI47 895 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms