RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 ZNF654Q8IZM8 581 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 KIFAP3Q92845 792 aa14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 ZSCAN10Q96SZ4 725 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-216ENST00000591545 SMCO2A6NFE2 343 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 PHKA1P46020 1223 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 RUFY4Q6ZNE9 571 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 SDR42E1Q8WUS8 393 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 HAUS7Q99871 368 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 OVOS2A0A0G2JMS6 1433 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 OVOS2A0A0J9YW53 1432 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 OVOS2Q6IE36 1432 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 NOL3O60936 208 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 PROSER3Q2NL68 480 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 UBLCP1Q8WVY7 318 aaPredicted RBP14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 PSMD1Q99460 953 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 KCNK9Q9NPC2 374 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 SPATA31A6Q5VVP1 1343 aa14.77□□□□□ -0.04
SMARCA4-216ENST00000591545 E7EWF7 191 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 MIER3Q7Z3K6 550 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 NCOA5Q9HCD5 579 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 CTNND2Q9UQB3 1225 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 SYNRGQ9UMZ2 1314 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 TNS3Q68CZ2 1445 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 A0A1B0GUA9 196 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 GJC1P36383 396 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 PNMA1Q8ND90 353 aa14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 DDX23Q9BUQ8 820 aaKnown RBP14.77□□□□□ -0.05
SMARCA4-216ENST00000591545 CETN3O15182 167 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 NOX5Q96PH1 765 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 SEC62Q99442 399 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 NDC80O14777 642 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 SEC31BQ9NQW1 1179 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 LRRC47Q8N1G4 583 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 RPGRIP1Q96KN7 1286 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 PSTPIP2Q9H939 334 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 CIB2O75838 187 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 COA1Q9GZY4 146 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 DHX36Q9H2U1 1008 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.76□□□□□ -0.051e-10■■□□□ 14.3
SMARCA4-216ENST00000591545 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
SMARCA4-216ENST00000591545 ARHGAP25P42331 645 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 MRPS9P82933 396 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 NR1I2O75469 434 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 PAK1Q13153 545 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 MAEAQ7L5Y9 396 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 LEO1Q8WVC0 666 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 PLEKHF1Q96S99 279 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 NT5C3AQ9H0P0 336 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 CCPG1Q9ULG6 757 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 ZBTB7AO95365 584 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 KRT5P13647 590 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 HERC4Q5GLZ8 1057 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 STMN2Q93045 179 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 SECISBP2LQ93073 1101 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 NDUFAB1O14561 156 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 RAPGEF1Q13905 1077 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 INF2Q27J81 1249 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 FYB2Q5VWT5 728 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 KRT40Q6A162 431 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 CCDC25Q86WR0 208 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 C10orf67Q8IYJ2 551 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 EDC3Q96F86 508 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 FAM169AQ9Y6X4 670 aa14.75□□□□□ -0.05
SMARCA4-216ENST00000591545 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 GOLGA6CA6NDK9 693 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 CCDC160A6NGH7 325 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 C21orf2O43822 256 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 GOLGA6DP0CG33 693 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 ATP11AP98196 1134 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 CDC42BPGQ6DT37 1551 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 KRBA2Q6ZNG9 492 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 SSH2Q76I76 1423 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 UBL4BQ8N7F7 174 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 PHKBQ93100 1093 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 PUS3Q9BZE2 481 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 GOLGA6AQ9NYA3 693 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 KLRF2D3W0D1 207 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 DNAJC21Q5F1R6 531 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 DEPTORQ8TB45 409 aa14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 UTP11Q9Y3A2 253 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-216ENST00000591545 TNFAIP3P21580 790 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms