RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
SEH1L-208ENST00000590843 MICALL1Q8N3F8 863 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 GABPB2Q8TAK5 448 aaPredicted RBP12.81□□□□□ -0.36
SEH1L-208ENST00000590843 TRPA1O75762 1119 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 KCNA4P22459 653 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 E2F5Q15329 346 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 RCSD1Q6JBY9 416 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 B4E1Z4 1266 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 Q3C1V9 767 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 TPCN1Q9ULQ1 816 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 KPNA6O60684 536 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 PSAPP07602 524 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 HHIPL2Q6UWX4 724 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 PRPF38AQ8NAV1 312 aaKnown RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 GH2P01242 217 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 LMAN1P49257 510 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 KIF11P52732 1056 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 XKR9Q5GH70 373 aa12.8□□□□□ -0.36
SEH1L-208ENST00000590843 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
SEH1L-208ENST00000590843 ABCC4O15439 1325 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 KIFAP3Q92845 792 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 SLIT1O75093 1534 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 EZRP15311 586 aaKnown RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 GOLGA8FQ08AF8 430 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 GOLGA8DPQ0D2H9 430 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 KCNG4Q8TDN1 519 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 ABCB11O95342 1321 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 GAS2L1Q99501 681 aaPredicted RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 SPAG1Q07617 926 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 POLA2Q14181 598 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 ZNF569Q5MCW4 686 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
SEH1L-208ENST00000590843 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
SEH1L-208ENST00000590843 ANXA13P27216 316 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 PHKA1P46020 1223 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 TBC1D9Q6ZT07 1266 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 GLTPD2A6NH11 291 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 PRPHP41219 470 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 CPT1AP50416 773 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 HLFQ16534 295 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 STIM2Q9P246 746 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 CALUO43852 315 aaPredicted RBP12.78□□□□□ -0.36
SEH1L-208ENST00000590843 RASSF7Q02833 373 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 KRT17Q04695 432 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 Q6ZUG5 572 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 DDX12PQ92771 950 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 PSMD1Q99460 953 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 UNC13BO14795 1591 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 KLRF2D3W0D1 207 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 CAMTA2O94983 1202 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 RAG1P15918 1043 aa12.78□□□□□ -0.36
SEH1L-208ENST00000590843 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
SEH1L-208ENST00000590843 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.36
SEH1L-208ENST00000590843 EPB41P11171 864 aaKnown RBP12.77□□□□□ -0.36
SEH1L-208ENST00000590843 POSTNQ15063 836 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 ANO3Q9BYT9 981 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 CEP152O94986 1710 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 HOXA2O43364 376 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 GOLGA5Q8TBA6 731 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.36
SEH1L-208ENST00000590843 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms