RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TNIP1Q15025 636 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 ELOA3BQ3SY89 546 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
SMAD4-209ENST00000589941 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 ELOA3Q8NG57 546 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 CD99L2Q8TCZ2 262 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 CRAMP1Q96RY5 1269 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 TEX13AQ9BXU3 409 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-209ENST00000589941 EFCC1Q9HA90 598 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 PTPN22Q9Y2R2 807 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 IBTKQ9P2D0 1353 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-209ENST00000589941 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-209ENST00000589941 GLYCTKQ8IVS8 523 aa10.35□□□□□ -0.75
SMAD4-209ENST00000589941 RBM17Q96I25 401 aaKnown RBP10.35□□□□□ -0.75
SMAD4-209ENST00000589941 ZNF333Q96JL9 665 aa10.35□□□□□ -0.75
SMAD4-209ENST00000589941 UBE2OQ9C0C9 1292 aaKnown RBP10.35□□□□□ -0.75
SMAD4-209ENST00000589941 DBNDD1Q9H9R9 158 aa10.35□□□□□ -0.75
SMAD4-209ENST00000589941 ENAMQ9NRM1 1142 aa10.35□□□□□ -0.75
SMAD4-209ENST00000589941 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
SMAD4-209ENST00000589941 A6NHS1 94 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 NTSR2O95665 410 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 GPTP24298 496 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 ADH7P40394 386 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
SMAD4-209ENST00000589941 PRAMEF18Q5VWM3 479 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 ALKBH2Q6NS38 261 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-209ENST00000589941 DPF2Q92785 391 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 ECM29Q5VYK3 1845 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
SMAD4-209ENST00000589941 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 FAM181BA6NEQ2 426 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 SOWAHDA6NJG2 315 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 ZBTB42B2RXF5 422 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 MMP20O60882 483 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 MAP3K6O95382 1288 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 MZF1P28698 734 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 ARHGAP4P98171 946 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 TEFQ10587 303 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 AAMPQ13685 434 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 CHSY3Q70JA7 882 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 Q7L0L9 218 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 DHX32Q7L7V1 743 aaKnown RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 SHISA4Q96DD7 197 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 VPS33BQ9H267 617 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 DNAJB12Q9NXW2 375 aaKnown RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 RAPGEFL1Q9UHV5 662 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 STARD13Q9Y3M8 1113 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 IVNS1ABPQ9Y6Y0 642 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 COL3A1P02461 1466 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-209ENST00000589941 MUC3AQ02505 3323 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 SPEF2Q9C093 1822 aa10.33□□□□□ -0.76
SMAD4-209ENST00000589941 SSC5DA1L4H1 1573 aa10.32□□□□□ -0.76
SMAD4-209ENST00000589941 AMPD1P23109 780 aa10.32□□□□□ -0.76
SMAD4-209ENST00000589941 SUSD4Q5VX71 490 aa10.32□□□□□ -0.76
SMAD4-209ENST00000589941 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
SMAD4-209ENST00000589941 NYXQ9GZU5 481 aa10.32□□□□□ -0.76
SMAD4-209ENST00000589941 WTIPA6NIX2 430 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-209ENST00000589941 IGF2BP3O00425 579 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMAD4-209ENST00000589941 FKBP1BP68106 108 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 KCNA1Q09470 495 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
SMAD4-209ENST00000589941 SLC6A14Q9UN76 642 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
SMAD4-209ENST00000589941 PTCH2Q9Y6C5 1203 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 CNTNAP5Q8WYK1 1306 aa10.31□□□□□ -0.76
SMAD4-209ENST00000589941 ALAS2P22557 587 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 MARSP56192 900 aaKnown RBP10.3□□□□□ -0.76
SMAD4-209ENST00000589941 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 C8orf34Q49A92 452 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 TTLL7Q6ZT98 887 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 TMEM63CQ9P1W3 806 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 NAGPAQ9UK23 515 aa10.3□□□□□ -0.76
SMAD4-209ENST00000589941 ECE2O60344 883 aa10.29□□□□□ -0.76
SMAD4-209ENST00000589941 DGKGP49619 791 aa10.29□□□□□ -0.76
SMAD4-209ENST00000589941 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
SMAD4-209ENST00000589941 C8orf86Q6ZUL3 223 aa10.29□□□□□ -0.76
SMAD4-209ENST00000589941 NGEFQ8N5V2 710 aa10.29□□□□□ -0.76
SMAD4-209ENST00000589941 ELP3Q9H9T3 547 aa10.29□□□□□ -0.76
SMAD4-209ENST00000589941 BTBD11A6QL63 1104 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 ALBP02768 609 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 RPS12P25398 132 aaKnown RBP10.28□□□□□ -0.76
SMAD4-209ENST00000589941 CRHR2Q13324 411 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 HFE2Q6ZVN8 426 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMAD4-209ENST00000589941 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 DPF3Q92784 378 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 PRDM6Q9NQX0 595 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
SMAD4-209ENST00000589941 GNAT3A8MTJ3 354 aa10.27□□□□□ -0.77
SMAD4-209ENST00000589941 CYP2E1P05181 493 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-209ENST00000589941 PCSK2P16519 638 aa10.27□□□□□ -0.77
SMAD4-209ENST00000589941 GPLD1P80108 840 aa10.27□□□□□ -0.77
SMAD4-209ENST00000589941 PRKG1Q13976 671 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms