RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ZPR1O75312 459 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 NLRC4Q9NPP4 1024 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ENC1O14682 589 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 SESN3P58005 492 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 ITIH3Q06033 890 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 HAUS3Q68CZ6 603 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 CABP7Q86V35 215 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 GRK7Q8WTQ7 553 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 TSC22D3Q99576 134 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 TYW1Q9NV66 732 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 BUB1O43683 1085 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 HEXIM1O94992 359 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 SKIP12755 728 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 TIMM10P62072 90 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 STAMQ92783 540 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 KRT12Q99456 494 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 DPH5Q9H2P9 285 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 AGTPBP1Q9UPW5 1226 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 GYS2P54840 703 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 SRLQ86TD4 932 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 EPB41L5Q9HCM4 733 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 TBC1D8O95759 1140 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 BAG2O95816 211 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 FBXO41Q8TF61 875 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 RILPQ96NA2 401 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 EYA1Q99502 592 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 METTL22Q9BUU2 404 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 LSM14BQ9BX40 385 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 TXLNGQ9NUQ3 528 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 LRWD1Q9UFC0 647 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 PPFIA2O75334 1257 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 TRIM37O94972 964 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 PARP1P09874 1014 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 IL9RQ01113 521 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 GSDMBQ8TAX9 411 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
SMARCA4-214ENST00000589677 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 BCRP11274 1271 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 SCRN1Q12765 414 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 VPS37BQ9H9H4 285 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 ADCY9O60503 1353 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 SEPT2Q15019 361 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 GOLGA8FQ08AF8 430 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 GOLGA8DPQ0D2H9 430 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 OSBPL5Q9H0X9 879 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 ARHGAP42A6NI28 874 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 CTNND1O60716 968 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 ZMYND10O75800 440 aa16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-214ENST00000589677 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.179e-8■■■■□ 21.6
SMARCA4-214ENST00000589677 EEF1GP26641 437 aaKnown RBP16.08■□□□□ 0.17
SMARCA4-214ENST00000589677 WDR44Q5JSH3 913 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 AFAP1L2Q8N4X5 818 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 KRT5P13647 590 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 PDIA3P30101 505 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 LRRC8CQ8TDW0 803 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 SUCLG2Q96I99 432 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 TUBB6Q9BUF5 446 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 PHBP35232 272 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 TXKP42681 527 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 POLE2P56282 527 aa16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 HERC4Q5GLZ8 1057 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-214ENST00000589677 ADCK5Q3MIX3 580 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 SSX2IPQ9Y2D8 614 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 SOWAHDA6NJG2 315 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 STAT1P42224 750 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 EIF3BP55884 814 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 C2orf54Q08AI8 447 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 PABPN1LA6NDY0 278 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 LINC00301Q8NCQ3 95 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 SNX29Q8TEQ0 813 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 CLIC6Q96NY7 704 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-214ENST00000589677 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms