RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 KIF3CO14782 793 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 ZNF543Q08ER8 600 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 SPP2Q13103 211 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 CCDC96Q2M329 555 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 NUP88Q99567 741 aaPredicted RBP28.74■■■□□ 2.19
RFX1-205ENST00000589239 VCPKMTQ9H867 229 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 GOPCQ9HD26 462 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 GPCPD1Q9NPB8 672 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 ORC3Q9UBD5 711 aaPredicted RBP28.74■■■□□ 2.19
RFX1-205ENST00000589239 CELF2O95319 508 aaKnown RBP28.73■■■□□ 2.19
RFX1-205ENST00000589239 ASPRV1Q53RT3 343 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 ZNF280CQ8ND82 737 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 AS3MTQ9HBK9 375 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 ISY1Q9ULR0 285 aaKnown RBP28.73■■■□□ 2.19
RFX1-205ENST00000589239 GNAQP50148 359 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 MTMR2Q13614 643 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 FAM184AQ8NB25 1140 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 DCAF4Q8WV16 495 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 WDR18Q9BV38 432 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 ELP3Q9H9T3 547 aa28.73■■■□□ 2.19
RFX1-205ENST00000589239 TRIM75PA6NK02 468 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 SSRP1Q08945 709 aaKnown RBP28.72■■■□□ 2.19
RFX1-205ENST00000589239 DGKZQ13574 1117 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 SLC35G1Q2M3R5 365 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 CNKSR2Q8WXI2 1034 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 GMCL1Q96IK5 515 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 CNTNAP5Q8WYK1 1306 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 FMNL1O95466 1100 aaPredicted RBP28.72■■■□□ 2.19
RFX1-205ENST00000589239 UBA5Q9GZZ9 404 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 KIAA1683Q9H0B3 1180 aa28.72■■■□□ 2.19
RFX1-205ENST00000589239 hCG_1642624A0A1W2PR95 340 aa28.71■■■□□ 2.19
RFX1-205ENST00000589239 USP17L10C9JJH3 530 aa28.71■■■□□ 2.19
RFX1-205ENST00000589239 CYTH3O43739 400 aa28.71■■■□□ 2.19
RFX1-205ENST00000589239 PKP1Q13835 747 aa28.71■■■□□ 2.19
RFX1-205ENST00000589239 GPATCH4Q5T3I0 446 aaKnown RBP28.71■■■□□ 2.19
RFX1-205ENST00000589239 TTBK2Q6IQ55 1244 aa28.71■■■□□ 2.19
RFX1-205ENST00000589239 LDLRAD1Q5T700 205 aa28.7■■■□□ 2.19
RFX1-205ENST00000589239 TRIM22Q8IYM9 498 aa28.7■■■□□ 2.19
RFX1-205ENST00000589239 GBA2Q9HCG7 927 aaPredicted RBP28.7■■■□□ 2.19
RFX1-205ENST00000589239 PIBF1Q8WXW3 757 aa28.7■■■□□ 2.18
RFX1-205ENST00000589239 RNF26Q9BY78 433 aaPredicted RBP28.7■■■□□ 2.18
RFX1-205ENST00000589239 AFG3L2Q9Y4W6 797 aa28.7■■■□□ 2.18
RFX1-205ENST00000589239 V9GY48 417 aaPredicted RBP28.7■■■□□ 2.18
RFX1-205ENST00000589239 BAZ2BQ9UIF8 2168 aaKnown RBP28.7■■■□□ 2.18
RFX1-205ENST00000589239 BMP3P12645 472 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 BACE1P56817 501 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 CST9Q5W186 159 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 LZTS2Q9BRK4 669 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 STK36Q9NRP7 1315 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 SYT1P21579 422 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 LARP1BQ659C4 914 aaKnown RBP28.69■■■□□ 2.18
RFX1-205ENST00000589239 AIFM3Q96NN9 605 aa28.69■■■□□ 2.18
RFX1-205ENST00000589239 PHIPQ8WWQ0 1821 aa28.68■■■□□ 2.18
RFX1-205ENST00000589239 SLC16A2P36021 539 aa28.68■■■□□ 2.18
RFX1-205ENST00000589239 FAM83BQ5T0W9 1011 aa28.68■■■□□ 2.18
RFX1-205ENST00000589239 FOSBP53539 338 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 FKBP1BP68106 108 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 OTUD5Q96G74 571 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 EMILIN3Q9NT22 766 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 PRPF3O43395 683 aaKnown RBP28.67■■■□□ 2.18
RFX1-205ENST00000589239 AKAP17AQ02040 695 aaKnown RBP28.67■■■□□ 2.18
RFX1-205ENST00000589239 C2orf69Q8N8R5 385 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 SPZ1Q9BXG8 430 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 VAT1LQ9HCJ6 419 aa28.67■■■□□ 2.18
RFX1-205ENST00000589239 ERO1BQ86YB8 467 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 CHMP5Q9NZZ3 219 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 KIF3AQ9Y496 699 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 TMEM232C9JQI7 657 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 DEXIO95424 95 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 YY1P25490 414 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 USP14P54578 494 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 HMGCS2P54868 508 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 PPATQ06203 517 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 LPAR1Q92633 364 aa28.66■■■□□ 2.18
RFX1-205ENST00000589239 CIZ1Q9ULV3 898 aaPredicted RBP28.66■■■□□ 2.18
RFX1-205ENST00000589239 SPDYE5A6NIY4 337 aa28.65■■■□□ 2.18
RFX1-205ENST00000589239 PKN1Q16512 942 aa28.65■■■□□ 2.18
RFX1-205ENST00000589239 ALG1Q9BT22 464 aa28.65■■■□□ 2.18
RFX1-205ENST00000589239 GJB4Q9NTQ9 266 aa28.65■■■□□ 2.18
RFX1-205ENST00000589239 IRF6O14896 467 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 PDCP20941 246 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 SMARCA1P28370 1054 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 OPTNQ96CV9 577 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 RIOX1Q9H6W3 641 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 STX6O43752 255 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 IKQ13123 557 aaPredicted RBP28.64■■■□□ 2.18
RFX1-205ENST00000589239 HOMER1Q86YM7 354 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 ADGRF4Q8IZF3 695 aa28.64■■■□□ 2.18
RFX1-205ENST00000589239 VCAM1P19320 739 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 C19orf81C9J6K1 198 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 SMC1BQ8NDV3 1235 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 SLC10A4Q96EP9 437 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 PIGSQ96S52 555 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 JMJD4Q9H9V9 463 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 PASKQ96RG2 1323 aa28.63■■■□□ 2.17
RFX1-205ENST00000589239 VPS37CA5D8V6 355 aaPredicted RBP28.62■■■□□ 2.17
RFX1-205ENST00000589239 UNCXA6NJT0 531 aa28.62■■■□□ 2.17
RFX1-205ENST00000589239 GUCY1B3Q02153 619 aa28.62■■■□□ 2.17
RFX1-205ENST00000589239 OTUD7BQ6GQQ9 843 aa28.62■■■□□ 2.17
RFX1-205ENST00000589239 ZDHHC9Q9Y397 364 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms