RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PKN3Q6P5Z2 889 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 FOXD4L3Q6VB84 417 aaPredicted RBP10.17□□□□□ -0.78
VMP1-208ENST00000588617 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 MTMR8Q96EF0 704 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 SMAD5Q99717 465 aaKnown RBP10.17□□□□□ -0.78
VMP1-208ENST00000588617 KCNK4Q9NYG8 393 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 WHRNQ9P202 907 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 IGF1RP08069 1367 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 EFCAB14O75071 495 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 NPTXRO95502 500 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 CST3P01034 146 aaPredicted RBP10.16□□□□□ -0.78
VMP1-208ENST00000588617 CD247P20963 164 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 RAB27AP51159 221 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 SLBPQ14493 270 aaKnown RBP eCLIP10.16□□□□□ -0.78
VMP1-208ENST00000588617 ANKRD39Q53RE8 183 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 LHFPL2Q6ZUX7 228 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 FGD2Q7Z6J4 655 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 DMRTC2Q8IXT2 367 aaPredicted RBP10.16□□□□□ -0.78
VMP1-208ENST00000588617 ADCY4Q8NFM4 1077 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 ZNF526Q8TF50 670 aaPredicted RBP10.16□□□□□ -0.78
VMP1-208ENST00000588617 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 MRGPRX3Q96LB0 322 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 ATXN3LQ9H3M9 355 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 AP4E1Q9UPM8 1137 aa10.16□□□□□ -0.78
VMP1-208ENST00000588617 KPNA6O60684 536 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 ASLP04424 464 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 POU3F2P20265 443 aaPredicted RBP10.15□□□□□ -0.78
VMP1-208ENST00000588617 NEK2P51955 445 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 RHBDL3P58872 404 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 MTMR1Q13613 665 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 ZNF460Q14592 562 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 TTLL4Q14679 1199 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 STAT4Q14765 748 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 DHCR24Q15392 516 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 POMZP3Q6PJE2 187 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 UBE3DQ7Z6J8 389 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 C7orf61Q8IZ16 206 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 UBASH3BQ8TF42 649 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 BTN2A2Q8WVV5 523 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 EMC9Q9Y3B6 208 aa10.15□□□□□ -0.78
VMP1-208ENST00000588617 BLACEA4D250 179 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 GPR39O43194 453 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 DLX3O60479 287 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 RNGTTO60942 597 aaKnown RBP10.14□□□□□ -0.79
VMP1-208ENST00000588617 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 ITGA4P13612 1032 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 GNALP38405 381 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 DUOXA2Q1HG44 320 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
VMP1-208ENST00000588617 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 CRACR2BQ8N4Y2 399 aaPredicted RBP10.14□□□□□ -0.79
VMP1-208ENST00000588617 GSTCDQ8NEC7 633 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 RCC1LQ96I51 464 aaKnown RBP10.14□□□□□ -0.79
VMP1-208ENST00000588617 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
VMP1-208ENST00000588617 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
VMP1-208ENST00000588617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.13□□□□□ -0.79
VMP1-208ENST00000588617 BRINP1O60477 761 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 KCNH1O95259 989 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 NEFMP07197 916 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 JMJD7P0C870 316 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 FLT3P36888 993 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 CAP2P40123 477 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 BIRC2Q13490 618 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 AUHQ13825 339 aaKnown RBP10.13□□□□□ -0.79
VMP1-208ENST00000588617 MAP9Q49MG5 647 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 NBPF12Q5TAG4 269 aaPredicted RBP10.13□□□□□ -0.79
VMP1-208ENST00000588617 CHPFQ8IZ52 775 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 USP7Q93009 1102 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 MAGEB10Q96LZ2 347 aaPredicted RBP10.13□□□□□ -0.79
VMP1-208ENST00000588617 CCDC8Q9H0W5 538 aaPredicted RBP10.13□□□□□ -0.79
VMP1-208ENST00000588617 GP6Q9HCN6 339 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 ZIM2Q9NZV7 527 aa10.13□□□□□ -0.79
VMP1-208ENST00000588617 AKAP10O43572 662 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 CAND2O75155 1236 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 ATF3P18847 181 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 IGFALSP35858 605 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 KCNJ6P48051 423 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
VMP1-208ENST00000588617 CFAP100Q494V2 611 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 MYO1HQ8N1T3 1032 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 ARHGEF39Q8N4T4 335 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
VMP1-208ENST00000588617 KCTD13Q8WZ19 329 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 BRF1Q92994 677 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 ISL2Q96A47 359 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 SCLYQ96I15 445 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 FOXQ1Q9C009 403 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 PIDD1Q9HB75 910 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 FBXL21Q9UKT6 434 aa10.12□□□□□ -0.79
VMP1-208ENST00000588617 SF1Q15637 639 aaKnown RBP10.11□□□□□ -0.79
VMP1-208ENST00000588617 NOL9Q5SY16 702 aaKnown RBP10.11□□□□□ -0.79
VMP1-208ENST00000588617 NUTM2GQ5VZR2 741 aa10.11□□□□□ -0.79
VMP1-208ENST00000588617 CHSY3Q70JA7 882 aa10.11□□□□□ -0.79
VMP1-208ENST00000588617 UBE2R2Q712K3 238 aaPredicted RBP10.11□□□□□ -0.79
VMP1-208ENST00000588617 DYMQ7RTS9 669 aa10.11□□□□□ -0.79
VMP1-208ENST00000588617 C14orf80Q86SX3 495 aa10.11□□□□□ -0.79
VMP1-208ENST00000588617 SPATS2Q86XZ4 545 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms