RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 KLRC3Q07444 240 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 GRB14Q14449 540 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
TPM4-209ENST00000588483 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 PAK6Q9NQU5 681 aaPredicted RBP12.45□□□□□ -0.42
TPM4-209ENST00000588483 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
TPM4-209ENST00000588483 IGHA2P01877 340 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 CCL5P13501 91 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 EN2P19622 333 aaPredicted RBP12.44□□□□□ -0.42
TPM4-209ENST00000588483 PTPREP23469 700 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 RGS2P41220 211 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 GJA8P48165 433 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 CWC27Q6UX04 472 aaKnown RBP12.44□□□□□ -0.42
TPM4-209ENST00000588483 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 TRIB2Q92519 343 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 APBA2Q99767 749 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 MOV10L1Q9BXT6 1211 aaKnown RBP12.44□□□□□ -0.42
TPM4-209ENST00000588483 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 IL17RBQ9NRM6 502 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
TPM4-209ENST00000588483 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 VWA5AO00534 786 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 ATP2A1O14983 1001 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 STRNO43815 780 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 TMEM132BQ14DG7 1078 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 AKNAD1Q5T1N1 836 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
TPM4-209ENST00000588483 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
TPM4-209ENST00000588483 GMCL1Q96IK5 515 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 UNC93B1Q9H1C4 597 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 IL25Q9H293 177 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 MROH8Q9H579 483 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
TPM4-209ENST00000588483 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
TPM4-209ENST00000588483 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 PLA2G6O60733 806 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 SLC25A27O95847 323 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 ERCC3P19447 782 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 CYP2B6P20813 491 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 COPB2P35606 906 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
TPM4-209ENST00000588483 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
TPM4-209ENST00000588483 SLF1Q9BQI6 1058 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 RNF41Q9H4P4 317 aaPredicted RBP12.42□□□□□ -0.42
TPM4-209ENST00000588483 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 BIN2Q9UBW5 565 aaPredicted RBP12.42□□□□□ -0.42
TPM4-209ENST00000588483 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
TPM4-209ENST00000588483 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 SGPL1O95470 568 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 FDX1P10109 184 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 CHMLP26374 656 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 MFSD6Q6ZSS7 791 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 U2AF1L4Q8WU68 220 aaKnown RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 NUP88Q99567 741 aaPredicted RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
TPM4-209ENST00000588483 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
TPM4-209ENST00000588483 ZNF213O14771 459 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 NMT2O60551 498 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 BMP3P12645 472 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 ADORA2AP29274 412 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 STAT3P40763 770 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 OAZ1P54368 228 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 HAND2P61296 217 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 TRIM32Q13049 653 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 TTC14Q96N46 770 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 TEX13BQ9BXU2 312 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.425e-7■■■■■ 28.2
TPM4-209ENST00000588483 HMX1Q9NP08 348 aaPredicted RBP12.4□□□□□ -0.42
TPM4-209ENST00000588483 STX8Q9UNK0 236 aa12.4□□□□□ -0.42
TPM4-209ENST00000588483 NEDD4P46934 1319 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 SGSM2O43147 1006 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 MYCP01106 439 aaPredicted RBP12.39□□□□□ -0.43
TPM4-209ENST00000588483 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
TPM4-209ENST00000588483 SLC1A4P43007 532 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 STAT2P52630 851 aa12.39□□□□□ -0.43
TPM4-209ENST00000588483 CCL14Q16627 93 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms