RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 FAM196AQ6ZSG2 479 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 WAPLQ7Z5K2 1190 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 SHISA4Q96DD7 197 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 VWCEQ96DN2 955 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 NCANO14594 1321 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 OR14I1A6ND48 311 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 RFXAPO00287 272 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 TLR3O15455 904 aaKnown RBP5.97□□□□□ -1.45
VPS4B-203ENST00000588323 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
VPS4B-203ENST00000588323 CTSWP56202 376 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 PCBP3P57721 371 aaKnown RBP5.97□□□□□ -1.45
VPS4B-203ENST00000588323 SLC14A2Q15849 920 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 ARSHQ5FYA8 562 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 ADGRF1Q5T601 910 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 SIRT2Q8IXJ6 389 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 USHBP1Q8N6Y0 703 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 DAGLBQ8NCG7 672 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 G6PC3Q9BUM1 346 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 SGPP1Q9BX95 441 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 HDAC8Q9BY41 377 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 FOXP3Q9BZS1 431 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS4B-203ENST00000588323 ZNF281Q9Y2X9 895 aa5.97□□□□□ -1.45
VPS4B-203ENST00000588323 ROBO2Q9HCK4 1378 aa5.96□□□□□ -1.45
VPS4B-203ENST00000588323 SLC22A31A6NKX4 558 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 GARTP22102 1010 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 KIR2DL1P43626 348 aaPredicted RBP5.96□□□□□ -1.46
VPS4B-203ENST00000588323 KIR2DL2P43627 348 aaPredicted RBP5.96□□□□□ -1.46
VPS4B-203ENST00000588323 ZNF385BQ569K4 471 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 CEP128Q6ZU80 1094 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 NLRX1Q86UT6 975 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 ZNF655Q8N720 491 aaPredicted RBP5.96□□□□□ -1.46
VPS4B-203ENST00000588323 TCTN2Q96GX1 697 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 GCM1Q9NP62 436 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 KBTBD4Q9NVX7 518 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 TCFL5Q9UL49 500 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 KCTD3Q9Y597 815 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 PCDHB14Q9Y5E9 798 aa5.96□□□□□ -1.46
VPS4B-203ENST00000588323 NRDCO43847 1150 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 UBOX5O94941 541 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 BMP7P18075 431 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 HOXA5P20719 270 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
VPS4B-203ENST00000588323 TCERG1LQ5VWI1 586 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 TMC3Q7Z5M5 1100 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 MAP6Q96JE9 813 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 ZCCHC4Q9H5U6 513 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 BRMS1Q9HCU9 246 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 PARD6AQ9NPB6 346 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 GMIPQ9P107 970 aa5.95□□□□□ -1.46
VPS4B-203ENST00000588323 SUPT16HQ9Y5B9 1047 aaKnown RBP5.95□□□□□ -1.46
VPS4B-203ENST00000588323 NOTOA8MTQ0 251 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 FKTNO75072 461 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 SYPP08247 313 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 SRSF3P84103 164 aaKnown RBP5.94□□□□□ -1.46
VPS4B-203ENST00000588323 RAD51AP2Q09MP3 1159 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 NBPF9Q3BBW0 867 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 NBPF12Q5TAG4 269 aaPredicted RBP5.94□□□□□ -1.46
VPS4B-203ENST00000588323 FBXL19Q6PCT2 694 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 LINC00116Q8NCU8 138 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 CRTAC1Q9NQ79 661 aa5.94□□□□□ -1.46
VPS4B-203ENST00000588323 TMEM82A0PJX8 343 aa5.93□□□□□ -1.46
VPS4B-203ENST00000588323 POLR2BP30876 1174 aaKnown RBP5.93□□□□□ -1.46
VPS4B-203ENST00000588323 EIF4A3P38919 411 aaKnown RBP5.93□□□□□ -1.46
VPS4B-203ENST00000588323 SNW1Q13573 536 aaKnown RBP5.93□□□□□ -1.46
VPS4B-203ENST00000588323 OVOS1Q6IE37 1185 aa5.93□□□□□ -1.46
VPS4B-203ENST00000588323 ERMP1Q7Z2K6 904 aa5.93□□□□□ -1.46
VPS4B-203ENST00000588323 COPRSQ9NQ92 184 aa5.93□□□□□ -1.46
VPS4B-203ENST00000588323 SIRT5Q9NXA8 310 aa5.93□□□□□ -1.46
VPS4B-203ENST00000588323 HRKO00198 91 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 CLEC3AO75596 197 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 ATE1O95260 518 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 PDIA4P13667 645 aaKnown RBP5.92□□□□□ -1.46
VPS4B-203ENST00000588323 PNLIPP16233 465 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 ERCC3P19447 782 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 BUD31P41223 144 aaPredicted RBP5.92□□□□□ -1.46
VPS4B-203ENST00000588323 SSPNQ14714 243 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 BBS9Q3SYG4 887 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 HHIPL1Q96JK4 782 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 SIGLEC10Q96LC7 697 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 KCNQ5Q9NR82 932 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 MBD1Q9UIS9 605 aaPredicted RBP5.92□□□□□ -1.46
VPS4B-203ENST00000588323 IRAK3Q9Y616 596 aa5.92□□□□□ -1.46
VPS4B-203ENST00000588323 SIGLEC6O43699 453 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 GREM1O60565 184 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 EFEMP2O95967 443 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 PI3P19957 117 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 RTP1P59025 263 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 CDCP2Q5VXM1 449 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 ZPBP2Q6X784 338 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 NLRC3Q7RTR2 1065 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 ZNF296Q8WUU4 475 aaPredicted RBP5.91□□□□□ -1.46
VPS4B-203ENST00000588323 RELTQ969Z4 430 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 FCRL2Q96LA5 508 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms