RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
CCDC130-208ENST00000588071 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
CCDC130-208ENST00000588071 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
CCDC130-208ENST00000588071 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 ZBTB48P10074 688 aaPredicted RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GJA5P36382 358 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 KIAA1755Q5JYT7 1200 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GADL1Q6ZQY3 521 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 LZTS2Q9BRK4 669 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 NCOA5Q9HCD5 579 aaKnown RBP16.44■□□□□ 0.22
CCDC130-208ENST00000588071 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
CCDC130-208ENST00000588071 MYH6P13533 1939 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 A0A0G2JLL6 359 aaPredicted RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 CDC27P30260 824 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 GTF2A2P52657 109 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 DGKZQ13574 1117 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 FASTKD5Q7L8L6 764 aaKnown RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 PRRT2Q7Z6L0 340 aaPredicted RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 HHIPL1Q96JK4 782 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 C12orf42Q96LP6 360 aa16.43■□□□□ 0.22
CCDC130-208ENST00000588071 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
CCDC130-208ENST00000588071 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 KLRF2D3W0D1 207 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 CETPP11597 493 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 VCAM1P19320 739 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 TTBK2Q6IQ55 1244 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 CMTR1Q8N1G2 835 aaKnown RBP16.42■□□□□ 0.22
CCDC130-208ENST00000588071 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
CCDC130-208ENST00000588071 RPAP3Q9H6T3 665 aaPredicted RBP16.42■□□□□ 0.22
CCDC130-208ENST00000588071 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
CCDC130-208ENST00000588071 NID2Q14112 1375 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 CDKL5O76039 1030 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 GRM1Q13255 1194 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
CCDC130-208ENST00000588071 PROCA1Q8NCQ7 364 aaPredicted RBP16.41■□□□□ 0.22
CCDC130-208ENST00000588071 CHURC1Q8WUH1 139 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 VAT1LQ9HCJ6 419 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
CCDC130-208ENST00000588071 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
CCDC130-208ENST00000588071 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SLC10A3P09131 477 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SLC16A2P36021 539 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 STAT2P52630 851 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 AKAP17AQ02040 695 aaKnown RBP16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
CCDC130-208ENST00000588071 USP17L24Q0WX57 530 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 CCL15Q16663 113 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
CCDC130-208ENST00000588071 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 LLPHQ9BRT6 129 aaKnown RBP16.4■□□□□ 0.22
CCDC130-208ENST00000588071 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
CCDC130-208ENST00000588071 MANSC4A6NHS7 340 aaPredicted RBP16.39■□□□□ 0.21
CCDC130-208ENST00000588071 FLOT1O75955 427 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC130-208ENST00000588071 CUL4AQ13619 759 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 TREML2Q5T2D2 321 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 CATSPERGQ6ZRH7 1159 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 TRIM22Q8IYM9 498 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 MS4A4AQ96JQ5 239 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms