RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 BMP3P12645 472 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 JAG1P78504 1218 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 SCRN1Q12765 414 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 PRKG1Q13976 671 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 TMTC3Q6ZXV5 915 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 RNF26Q9BY78 433 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 PTPRFP10586 1907 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 LOC285556D6RIA3 1793 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 A0A0G2JLL6 359 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 A0A1W2PRG0 241 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 NDUFB10O96000 172 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 XBP1P17861 261 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 STAT2P52630 851 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 GTF2A2P52657 109 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 HUNKP57058 714 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 SPP2Q13103 211 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 STK3Q13188 491 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 MTMR2Q13614 643 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 CST9Q5W186 159 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 NOL8Q76FK4 1167 aaKnown RBP12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 PRRT2Q7Z6L0 340 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 SENP2Q9HC62 589 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 MAD2L2Q9UI95 211 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
CLPTM1-207ENST00000587537 TRIM75PA6NK02 468 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 KLRF2D3W0D1 207 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 PRPF3O43395 683 aaKnown RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 DEXIO95424 95 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 CETPP11597 493 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 ECE1P42892 770 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 INHBEP58166 350 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 SSRP1Q08945 709 aaKnown RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 SAPCD2Q86UD0 394 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 ACER1Q8TDN7 264 aa12□□□□□ -0.49
CLPTM1-207ENST00000587537 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
CLPTM1-207ENST00000587537 MYH6P13533 1939 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 LARGE1O95461 756 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 HOXA7P31268 230 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 NTRK3Q16288 839 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 SHROOM1Q2M3G4 852 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 RGMBQ6NW40 437 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 CLEC10AQ8IUN9 316 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 FAM184AQ8NB25 1140 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 CCDC12Q8WUD4 166 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 WNK4Q96J92 1243 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 MAF1Q9H063 256 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-207ENST00000587537 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 MANSC4A6NHS7 340 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 IRF6O14896 467 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 RAD21O60216 631 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 VCAM1P19320 739 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 CDC27P30260 824 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 APLP1P51693 650 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 HMGCS2P54868 508 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 SPRYD7Q5W111 196 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 DLK2Q6UY11 383 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 MB21D1Q8N884 522 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
CLPTM1-207ENST00000587537 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms