RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 PDHBP11177 359 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 ZNF157P51786 506 aaPredicted RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 BACE1P56817 501 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 NCOA5Q9HCD5 579 aaKnown RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 PARP14Q460N5 1801 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 CDC27P30260 824 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 SLC1A4P43007 532 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 APLP1P51693 650 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 NTRK3Q16288 839 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 RTN1Q16799 776 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 RGMBQ6NW40 437 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
NFIX-208ENST00000587260 SMC3Q9UQE7 1217 aa17.37■□□□□ 0.37
NFIX-208ENST00000587260 DTNBO60941 627 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
NFIX-208ENST00000587260 USP14P54578 494 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
NFIX-208ENST00000587260 GRM1Q13255 1194 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 GRM4Q14833 912 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
NFIX-208ENST00000587260 CPLX1O14810 134 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 CDKL5O76039 1030 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
NFIX-208ENST00000587260 VCAM1P19320 739 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
NFIX-208ENST00000587260 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 STAG2Q8N3U4 1231 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 DCAF4Q8WV16 495 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 TMOD4Q9NZQ9 345 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 KCNH4Q9UQ05 1017 aa17.35■□□□□ 0.37
NFIX-208ENST00000587260 MYH6P13533 1939 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 A0A0G2JLL6 359 aaPredicted RBP17.34■□□□□ 0.37
NFIX-208ENST00000587260 C19orf81C9J6K1 198 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 PPFIA3O75145 1194 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
NFIX-208ENST00000587260 IFNAR1P17181 557 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 GJB2P29033 226 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 KIF5BP33176 963 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 PRRT2Q7Z6L0 340 aaPredicted RBP17.34■□□□□ 0.37
NFIX-208ENST00000587260 CMTR1Q8N1G2 835 aaKnown RBP17.34■□□□□ 0.37
NFIX-208ENST00000587260 LPAR1Q92633 364 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 CREBZFQ9NS37 354 aa17.34■□□□□ 0.37
NFIX-208ENST00000587260 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.37
NFIX-208ENST00000587260 CXCL11O14625 94 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 SLC10A3P09131 477 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 ZBTB48P10074 688 aaPredicted RBP17.33■□□□□ 0.37
NFIX-208ENST00000587260 BMP3P12645 472 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 ZNF543Q08ER8 600 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 SNAPC2Q13487 334 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.37
NFIX-208ENST00000587260 C12orf42Q96LP6 360 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 RPAP3Q9H6T3 665 aaPredicted RBP17.33■□□□□ 0.37
NFIX-208ENST00000587260 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.37
NFIX-208ENST00000587260 PTPDC1A2A3K4 754 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
NFIX-208ENST00000587260 JAK2O60674 1132 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 FDPSP14324 419 aaKnown RBP17.32■□□□□ 0.36
NFIX-208ENST00000587260 GNAQP50148 359 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 HTRA3P83110 453 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 FUT2Q10981 343 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
NFIX-208ENST00000587260 SH3D19Q5HYK7 790 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 TMTC3Q6ZXV5 915 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 RGS22Q8NE09 1264 aa17.32■□□□□ 0.36
NFIX-208ENST00000587260 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 SLC16A2P36021 539 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 GTF2A2P52657 109 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 UBA5Q9GZZ9 404 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 KIF3AQ9Y496 699 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 STK36Q9NRP7 1315 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 RLFQ13129 1914 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 KLRF2D3W0D1 207 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms