RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NEDD4P46934 1319 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 SLC25A27O95847 323 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 PXYLP1Q8TE99 480 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 ARMC5Q96C12 935 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 NBPF3Q9H094 633 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 IL17RBQ9NRM6 502 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 PNMA2Q9UL42 364 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 HPS5Q9UPZ3 1129 aa16.26■□□□□ 0.19
PRKCSH-202ENST00000585540 ZNF236Q9UL36 1845 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 CYP21A2P08686 494 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 BMP3P12645 472 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 STAT2P52630 851 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 OAZ1P54368 228 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 FAM83BQ5T0W9 1011 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 RAET1EQ8TD07 263 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 UBAC1Q9BSL1 405 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 PAGR1Q9BTK6 254 aa16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 RBM8AQ9Y5S9 174 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-202ENST00000585540 STRNO43815 780 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 RAD21O60216 631 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 SLC1A4P43007 532 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 PTH1RQ03431 593 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 LRRC47Q8N1G4 583 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 SPATC1LQ9H0A9 340 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 MROH8Q9H579 483 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 TXNRD2Q9NNW7 524 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
PRKCSH-202ENST00000585540 ERICH2A1L162 156 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 B4E1Z4 1266 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 KDM4AO75164 1064 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 CNMDO75829 334 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 REC8O95072 547 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 XRCC5P13010 732 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 SLC9C1Q4G0N8 1177 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 ABRAQ8N0Z2 381 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 ZSCAN10Q96SZ4 725 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 CTDP1Q9Y5B0 961 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 PTCH2Q9Y6C5 1203 aa16.23■□□□□ 0.19
PRKCSH-202ENST00000585540 VWA5AO00534 786 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 ZBED4O75132 1171 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 CTGFP29279 349 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 GRK4P32298 578 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 UBXN2AP68543 259 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 PRKCZQ05513 592 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 RIOX2Q8IUF8 465 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 SLC5A4Q9NY91 659 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 ZSWIM5Q9P217 1185 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
PRKCSH-202ENST00000585540 TNKSO95271 1327 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 SLC15A5A6NIM6 579 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 SNHG28P0DPA3 235 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 RGS2P41220 211 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 FLT3LGP49771 235 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 KRT32Q14532 448 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 NECTIN1Q15223 517 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 Q3C1V9 767 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 KAT14Q9H8E8 782 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 BTBD7Q9P203 1132 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 FBXO40Q9UH90 709 aa16.21■□□□□ 0.19
PRKCSH-202ENST00000585540 E7EWF7 191 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 NMT2O60551 498 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 CAP1Q01518 475 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 TKFCQ3LXA3 575 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 TSGA10IPQ3SY00 556 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 REPS2Q8NFH8 660 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 APBA2Q99767 749 aa16.2■□□□□ 0.18
PRKCSH-202ENST00000585540 MOV10L1Q9BXT6 1211 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms