RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CALM3P0DP25 149 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 BMP3P12645 472 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 Q6ZUG5 572 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 DDAH1O94760 285 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 CPA1P15085 419 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 KIAA1755Q5JYT7 1200 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 SGMS1Q86VZ5 419 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 IL27Q8NEV9 243 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 ASCC2Q9H1I8 757 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
SCAMP4-209ENST00000585335 MYPNQ86TC9 1320 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 FLOT1O75955 427 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 PDHBP11177 359 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 KIF5BP33176 963 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 COG2Q14746 738 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 ZNF654Q8IZM8 581 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-209ENST00000585335 TRPA1O75762 1119 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 NEK4P51957 841 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 STAT2P52630 851 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 RABEP1Q15276 862 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 BRF1Q92994 677 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 RNF186Q9NXI6 227 aa17.03■□□□□ 0.32
SCAMP4-209ENST00000585335 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 PLA2G6O60733 806 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 SNHG28P0DPA3 235 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 HERVK_113P62684 666 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 ZNF543Q08ER8 600 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 CRHR2Q13324 411 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 ALDH8A1Q9H2A2 487 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 SENP2Q9HC62 589 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
SCAMP4-209ENST00000585335 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 ZBTB43O43298 467 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 FDX1P10109 184 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 CYP2C8P10632 490 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 GNAQP50148 359 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 RCAN1P53805 252 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 GRM4Q14833 912 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 APOA5Q6Q788 366 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 MB21D1Q8N884 522 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 GPCPD1Q9NPB8 672 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 PPP1R9AQ9ULJ8 1098 aa17.01■□□□□ 0.31
SCAMP4-209ENST00000585335 GOLGA8BA8MQT2 603 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 ST18O60284 1047 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 TLR2O60603 784 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 DSG3P32926 999 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 APOBRQ0VD83 1088 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 TROAPQ12815 778 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 MICU3Q86XE3 530 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 KIFC2Q96AC6 838 aa17■□□□□ 0.31
SCAMP4-209ENST00000585335 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
SCAMP4-209ENST00000585335 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 ZBED4O75132 1171 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 GOLGA8HP0CJ92 632 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 SYDE2Q5VT97 1194 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 MYL10Q9BUA6 226 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms