RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PCBP4P57723 403 aaKnown RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 MCCD1P59942 119 aaPredicted RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 G3BP1Q13283 466 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDH8-213ENST00000584966 HDAC1Q13547 482 aaPredicted RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 TMEM164Q5U3C3 297 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 LARGE2Q8N3Y3 721 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 STK32AQ8WU08 396 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 EAF2Q96CJ1 260 aaPredicted RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 EYA3Q99504 573 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 ZC3H12CQ9C0D7 883 aaKnown RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 DBNDD1Q9H9R9 158 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 CD209Q9NNX6 404 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 GPR108Q9NPR9 543 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 DNAAF2Q9NVR5 837 aaKnown RBP6.95□□□□□ -1.3
CDH8-213ENST00000584966 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 ZNRF3Q9ULT6 936 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 HRH3Q9Y5N1 445 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 CDK5RAP2Q96SN8 1893 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 ZNF541Q9H0D2 1346 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 ADAMTSL1Q8N6G6 1762 aa6.95□□□□□ -1.3
CDH8-213ENST00000584966 AK9Q5TCS8 1911 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 FAM196BA6NMK8 535 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 ECE2O60344 883 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 HMMRO75330 724 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 GYG1P46976 350 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 CXCL9Q07325 125 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
CDH8-213ENST00000584966 ATP2B3Q16720 1220 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 TNNI3KQ59H18 835 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 TDRD7Q8NHU6 1098 aaKnown RBP6.94□□□□□ -1.3
CDH8-213ENST00000584966 RHPN1Q8TCX5 695 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 LPIN2Q92539 896 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 XAGE2Q96GT9 111 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 NOVA2Q9UNW9 492 aaKnown RBP6.94□□□□□ -1.3
CDH8-213ENST00000584966 GNEQ9Y223 722 aaKnown RBP6.94□□□□□ -1.3
CDH8-213ENST00000584966 FPGT-TNNI3KV9GXZ4 949 aa6.94□□□□□ -1.3
CDH8-213ENST00000584966 COL1A1P02452 1464 aaPredicted RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 A0A1B0GUL7 405 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 GLTPD2A6NH11 291 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 ATXN7O15265 892 aaPredicted RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 VIL1P09327 827 aaKnown RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 HIBADHP31937 336 aaKnown RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 B4GALNT3Q6L9W6 998 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 SMC5Q8IY18 1101 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 NIM1KQ8IY84 436 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 RHBDD1Q8TEB9 315 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 GMLQ99445 158 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 COA1Q9GZY4 146 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
CDH8-213ENST00000584966 FAM205AQ6ZU69 1335 aa6.93□□□□□ -1.3
CDH8-213ENST00000584966 USP17L15C9J2P7 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L10C9JJH3 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L13C9JLJ4 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L12C9JPN9 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L11C9JVI0 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L21D6R901 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L18D6R9N7 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L22D6RA61 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L17D6RBQ6 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L19D6RCP7 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L20D6RJB6 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 PSMD14O00487 310 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 RAD17O75943 681 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 DDNO94850 711 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 IFIT1P09914 478 aaKnown RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 MAPTP10636 758 aaKnown RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 SLC5A1P13866 664 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 PHKA1P46020 1223 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 KCNJ4P48050 445 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 USP17L24Q0WX57 530 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 CRTC2Q53ET0 693 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 HSP90AB4PQ58FF6 505 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 DACT2Q5SW24 774 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 SND1Q7KZF4 910 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH8-213ENST00000584966 ERC1Q8IUD2 1116 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 C16orf71Q8IYS4 520 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 CERS5Q8N5B7 392 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 KIF1BPQ96EK5 621 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 DBNDD2Q9BQY9 259 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 MXD3Q9BW11 206 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 CCDC8Q9H0W5 538 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 IL1RAPL2Q9NP60 686 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 DBNLQ9UJU6 430 aaKnown RBP6.92□□□□□ -1.3
CDH8-213ENST00000584966 AKAP2Q9Y2D5 859 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 SALL3Q9BXA9 1300 aa6.92□□□□□ -1.3
CDH8-213ENST00000584966 FOCADQ5VW36 1801 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms