RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 F5H6K3 240 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
TRAF4-215ENST00000584944 FLOT1O75955 427 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 EN2P19622 333 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-215ENST00000584944 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
TRAF4-215ENST00000584944 KLRC3Q07444 240 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 TSGA10IPQ3SY00 556 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 TREML2Q5T2D2 321 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
TRAF4-215ENST00000584944 TMTC2Q8N394 836 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 MKL1Q969V6 931 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-215ENST00000584944 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 PTCH2Q9Y6C5 1203 aa16.24■□□□□ 0.19
TRAF4-215ENST00000584944 LACTBP83111 547 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-215ENST00000584944 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 DHX32Q7L7V1 743 aaKnown RBP16.23■□□□□ 0.19
TRAF4-215ENST00000584944 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 ENAHQ8N8S7 591 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-215ENST00000584944 PNMA1Q8ND90 353 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 GMCL1P1Q8NEA9 526 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
TRAF4-215ENST00000584944 NDUFB10O96000 172 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 BMP3P12645 472 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 ANAPC15P60006 121 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 NBPF11Q86T75 865 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 SIAH1Q8IUQ4 282 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-215ENST00000584944 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-215ENST00000584944 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 ARHGAP39Q9C0H5 1083 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-215ENST00000584944 CWC22Q9HCG8 908 aaKnown RBP16.22■□□□□ 0.19
TRAF4-215ENST00000584944 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
TRAF4-215ENST00000584944 CYP2C8P10632 490 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-215ENST00000584944 GCLCP48506 637 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-215ENST00000584944 COG2Q14746 738 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 KIF22Q14807 665 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
TRAF4-215ENST00000584944 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
TRAF4-215ENST00000584944 GNRH1P01148 92 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 STAT2P52630 851 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 MOGSQ13724 837 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 NUP88Q99567 741 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-215ENST00000584944 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 FEM1BQ9UK73 627 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
TRAF4-215ENST00000584944 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 SEC24BO95487 1268 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
TRAF4-215ENST00000584944 CTGFP29279 349 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 HERVK_113P62684 666 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 PLS1Q14651 629 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
TRAF4-215ENST00000584944 RCSD1Q6JBY9 416 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-215ENST00000584944 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 KCNB2Q92953 911 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 KIFC2Q96AC6 838 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 SLF1Q9BQI6 1058 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 PHIPQ8WWQ0 1821 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 ADGRA2Q96PE1 1338 aa16.19■□□□□ 0.18
TRAF4-215ENST00000584944 ZBED4O75132 1171 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 CALM1P0DP23 149 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 CALM2P0DP24 149 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 CALM3P0DP25 149 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 KIF5BP33176 963 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 PRMT2P55345 433 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 ANTXR2P58335 489 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 CCNA1P78396 465 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 KCTD1Q719H9 257 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 RUFY3Q7L099 469 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
TRAF4-215ENST00000584944 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms