RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 LPAR1Q92633 364 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 ZBTB43O43298 467 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 PDHBP11177 359 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 BMP3P12645 472 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 VCAM1P19320 739 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 VEGFBP49765 207 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 ME3Q16798 604 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 RASGRP2Q7LDG7 609 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 ZIC5Q96T25 663 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-216ENST00000583804 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
TOP3A-216ENST00000583804 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
TOP3A-216ENST00000583804 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
TOP3A-216ENST00000583804 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 CALM1P0DP23 149 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 CALM2P0DP24 149 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 CALM3P0DP25 149 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 INHBEP58166 350 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 TROAPQ12815 778 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-216ENST00000583804 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-216ENST00000583804 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-216ENST00000583804 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 BTBD19C9JJ37 291 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 DDAH1O94760 285 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
TOP3A-216ENST00000583804 MOGSQ13724 837 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 PTPN18Q99952 460 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
TOP3A-216ENST00000583804 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
TOP3A-216ENST00000583804 TESPA1A2RU30 521 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-216ENST00000583804 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 TMEM232C9JQI7 657 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 FLOT1O75955 427 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 SNHG28P0DPA3 235 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
TOP3A-216ENST00000583804 KIF5BP33176 963 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 MCM2P49736 904 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
TOP3A-216ENST00000583804 FOSBP53539 338 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 EVCP57679 992 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 ZNF543Q08ER8 600 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 GRM4Q14833 912 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 RTN1Q16799 776 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 TTBK2Q6IQ55 1244 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
TOP3A-216ENST00000583804 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-216ENST00000583804 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-216ENST00000583804 PDHXO00330 501 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 OSBPP22059 807 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 MAP2K2P36507 400 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 TM4SF4P48230 202 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-216ENST00000583804 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
TOP3A-216ENST00000583804 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 STAG2Q8N3U4 1231 aa12.74□□□□□ -0.37
TOP3A-216ENST00000583804 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms