RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 ASCC2Q9H1I8 757 aaPredicted RBP5.97□□□□□ -1.45
VAPA-206ENST00000583475 SLAMF8Q9P0V8 285 aa5.97□□□□□ -1.45
VAPA-206ENST00000583475 ZNF281Q9Y2X9 895 aa5.97□□□□□ -1.45
VAPA-206ENST00000583475 CARMIL2Q6F5E8 1435 aa5.97□□□□□ -1.45
VAPA-206ENST00000583475 TEKQ02763 1124 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 ANKRD39Q53RE8 183 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 FYB2Q5VWT5 728 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 TTC6Q86TZ1 520 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 PPFIBP1Q86W92 1011 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 C7orf61Q8IZ16 206 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 ZNF655Q8N720 491 aaPredicted RBP5.96□□□□□ -1.46
VAPA-206ENST00000583475 ASIC4Q96FT7 647 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 TCTN2Q96GX1 697 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 MKRN2Q9H000 416 aaKnown RBP5.96□□□□□ -1.46
VAPA-206ENST00000583475 CAPN10Q9HC96 672 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 ZNF214Q9UL59 606 aaPredicted RBP5.96□□□□□ -1.46
VAPA-206ENST00000583475 MINPP1Q9UNW1 487 aa5.96□□□□□ -1.46
VAPA-206ENST00000583475 A0A1W2PQH9 124 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 SHOXO15266 292 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 SIGLEC6O43699 453 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 PRAMEF1O95521 474 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 LTKP29376 864 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 AXDND1Q5T1B0 1012 aaPredicted RBP5.95□□□□□ -1.46
VAPA-206ENST00000583475 TDRD10Q5VZ19 366 aaKnown RBP5.95□□□□□ -1.46
VAPA-206ENST00000583475 FAM169BQ8N8A8 192 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 C19orf47Q8N9M1 422 aaKnown RBP5.95□□□□□ -1.46
VAPA-206ENST00000583475 OR6P1Q8NGX9 317 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 CPLX3Q8WVH0 158 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 FMNL2Q96PY5 1086 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 EBF1Q9UH73 591 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 TMEM59LQ9UK28 342 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 FBXL21Q9UKT6 434 aa5.95□□□□□ -1.46
VAPA-206ENST00000583475 PAX4O43316 350 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 TP53P04637 393 aaPredicted RBP5.94□□□□□ -1.46
VAPA-206ENST00000583475 ZGLP1P0C6A0 271 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 AFMP43652 599 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 CASP7P55210 303 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 ERVFC1P60507 584 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 CCDC120Q96HB5 630 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 SP110Q9HB58 689 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 GFOD1Q9NXC2 390 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 RNF114Q9Y508 228 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 PCDHB12Q9Y5F1 795 aa5.94□□□□□ -1.46
VAPA-206ENST00000583475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
VAPA-206ENST00000583475 HK2P52789 917 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 RNF111Q6ZNA4 994 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 VPS37DQ86XT2 251 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 FAM168AQ92567 244 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 SMARCC1Q92922 1105 aaPredicted RBP5.93□□□□□ -1.46
VAPA-206ENST00000583475 TINF2Q9BSI4 451 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 FOXP3Q9BZS1 431 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 STRIP2Q9ULQ0 834 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 SLC12A7Q9Y666 1083 aa5.93□□□□□ -1.46
VAPA-206ENST00000583475 HPXP02790 462 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 CTSKP43235 329 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 PPP2R5EQ16537 467 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 BBS9Q3SYG4 887 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 LINC01599Q8WXQ3 324 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 ANAPC16Q96DE5 110 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 G6PC3Q9BUM1 346 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 FAM86C1Q9NVL1 165 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 TCFL5Q9UL49 500 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 PCDHB10Q9UN67 800 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 ZNF451Q9Y4E5 1061 aa5.92□□□□□ -1.46
VAPA-206ENST00000583475 TMEM82A0PJX8 343 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 ZNF503-AS2A6NEH8 195 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 MEIS1O00470 390 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 SYPP08247 313 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 CD247P20963 164 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 RPL10P27635 214 aaKnown RBP5.91□□□□□ -1.46
VAPA-206ENST00000583475 TXKP42681 527 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 PCBP3P57721 371 aaKnown RBP5.91□□□□□ -1.46
VAPA-206ENST00000583475 ZNF445P59923 1031 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 GNL2Q13823 731 aaKnown RBP5.91□□□□□ -1.46
VAPA-206ENST00000583475 GNPTABQ3T906 1256 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 ZSWIM9Q86XI8 627 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 PDZD8Q8NEN9 1154 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
VAPA-206ENST00000583475 KIRREL1Q96J84 757 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 PHAXQ9H814 394 aaKnown RBP5.91□□□□□ -1.46
VAPA-206ENST00000583475 GP6Q9HCN6 339 aa5.91□□□□□ -1.46
VAPA-206ENST00000583475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
VAPA-206ENST00000583475 CBFA2T2O43439 604 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 VAV1P15498 845 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 BMP8BP34820 402 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 TRHRP34981 398 aaPredicted RBP5.9□□□□□ -1.46
VAPA-206ENST00000583475 SLC7A5Q01650 507 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 ZPBP2Q6X784 338 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 SLC43A3Q8NBI5 491 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 MYLIPQ8WY64 445 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 KLHL6Q8WZ60 621 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 BRF1Q92994 677 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 GOLGA2P5Q9HBQ8 144 aa5.9□□□□□ -1.46
VAPA-206ENST00000583475 MRVI1Q9Y6F6 885 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms