RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SHD	Q96IW2	340 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	RC3H2	Q9HBD1	1191 aa	Known RBP	4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	SUCO	Q9UBS9	1254 aa	Known RBP	4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	DUSP13	Q9UII6	198 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	SLC12A7	Q9Y666	1083 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	FANCD2	Q9BXW9	1451 aa		4.98	□□□□□ -1.61
MSI2-215	ENST00000582453	CUX2	O14529	1486 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	ERCC6	Q03468	1493 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	CEP164	Q9UPV0	1460 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	SHISA3	A0PJX4	238 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	WASH4P	A8MWX3	477 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	JUNB	P17275	347 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	TAL1	P17542	331 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	PMS1	P54277	932 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	BBS9	Q3SYG4	887 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	UNC5A	Q6ZN44	842 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	RUFY4	Q6ZNE9	571 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	ATG4D	Q86TL0	474 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	CREG2	Q8IUH2	290 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	DAGLB	Q8NCG7	672 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	LRRN4CL	Q8ND94	238 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	CCDC120	Q96HB5	630 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	ALPK1	Q96QP1	1244 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	MKRN2	Q9H000	416 aa	Known RBP	4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	PRDM7	Q9NQW5	492 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	PRR13	Q9NZ81	148 aa		4.97	□□□□□ -1.61
MSI2-215	ENST00000582453	ABCC8	Q09428	1581 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	MRC2	Q9UBG0	1479 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	FAM86C2P	A6NEL3	165 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	BIN1	O00499	593 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	IGSF3	O75054	1194 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	ITGB5	P18084	799 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	LTK	P29376	864 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	EGR3	Q06889	387 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	SNW1	Q13573	536 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	ZYX	Q15942	572 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	TTC6	Q86TZ1	520 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	ZNF655	Q8N720	491 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	FLAD1	Q8NFF5	587 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	TINF2	Q9BSI4	451 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	HDAC8	Q9BY41	377 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	PRDM14	Q9GZV8	571 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453	PCDHB12	Q9Y5F1	795 aa		4.96	□□□□□ -1.62
MSI2-215	ENST00000582453		C9IYK1	514 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	SIGLEC6	O43699	453 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	CASP7	P55210	303 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	AUH	Q13825	339 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	ANKRD39	Q53RE8	183 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	TMC3	Q7Z5M5	1100 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	CCDC144CP	Q8IYA2	1237 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	C7orf61	Q8IZ16	206 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	PHAX	Q9H814	394 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	ZNF214	Q9UL59	606 aa	Predicted RBP	4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	PCDHA11	Q9Y5I1	949 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453	WDR62	O43379	1518 aa		4.95	□□□□□ -1.62
MSI2-215	ENST00000582453		A0A1W2PQH9	124 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	PAPLN	O95428	1278 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	PRAMEF1	O95521	474 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	GDNF	P39905	211 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	ARID5A	Q03989	594 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	TDRD10	Q5VZ19	366 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	RNF111	Q6ZNA4	994 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	PPFIBP1	Q86W92	1011 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	SLC43A3	Q8NBI5	491 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	SYTL4	Q96C24	671 aa	Predicted RBP	4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	TCTN2	Q96GX1	697 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	CHST7	Q9NS84	486 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	SLAMF8	Q9P0V8	285 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	TMEM59L	Q9UK28	342 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	FBXL21	Q9UKT6	434 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	CTNND2	Q9UQB3	1225 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	THOC2	Q8NI27	1593 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	LTBP3	Q9NS15	1303 aa		4.94	□□□□□ -1.62
MSI2-215	ENST00000582453	DNAJC25-GNG10	A0A024R161	153 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	SHOX	O15266	292 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	SSB	P05455	408 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	FGR	P09769	529 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	AFM	P43652	599 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	PCBP3	P57721	371 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	ZC3H6	P61129	1189 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	TEK	Q02763	1124 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	PPP2R5E	Q16537	467 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	RALGPS1	Q5JS13	557 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	FAM169B	Q8N8A8	192 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	LINC00116	Q8NCU8	138 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	DHX38	Q92620	1227 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	ANAPC16	Q96DE5	110 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	ASIC4	Q96FT7	647 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	GML	Q99445	158 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	6e-6	■□□□□ 9.2
MSI2-215	ENST00000582453	C19orf73	Q9NVV2	129 aa		4.93	□□□□□ -1.62
MSI2-215	ENST00000582453	TP53	P04637	393 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	RAC2	P15153	192 aa		4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	SLC7A5	Q01650	507 aa		4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	TNNI3K	Q59H18	835 aa		4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	DCAF15	Q66K64	600 aa		4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	USHBP1	Q8N6Y0	703 aa		4.92	□□□□□ -1.62
MSI2-215	ENST00000582453	ADAMTS10	Q9H324	1103 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms