RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
SMCHD1-207ENST00000581711 MAP6Q96JE9 813 aa8.29□□□□□ -1.08
SMCHD1-207ENST00000581711 ZMYM5Q9UJ78 669 aa8.29□□□□□ -1.08
SMCHD1-207ENST00000581711 RLBP1P12271 317 aa8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 SDHBP21912 280 aa8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 KIR2DL1P43626 348 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 KIR2DL2P43627 348 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 YBX1P67809 324 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 DIEXFQ68CQ4 756 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 CEP128Q6ZU80 1094 aa8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 BORCS6Q96GS4 357 aa8.28□□□□□ -1.08
SMCHD1-207ENST00000581711 CILPO75339 1184 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 BPNT1O95861 308 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 CDR1P51861 262 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 CCDC84Q86UT8 332 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 TMEFF1Q8IYR6 380 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 PHC3Q8NDX5 983 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 CCDC74BQ96LY2 380 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 HDAC8Q9BY41 377 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 ASCC2Q9H1I8 757 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 KLHL3Q9UH77 587 aa8.27□□□□□ -1.09
SMCHD1-207ENST00000581711 TMEM82A0PJX8 343 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 CHURC1-FNTBB4DL54 471 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 PNLIPP16233 465 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 OLFML2BQ68BL8 750 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 CNKSR3Q6P9H4 555 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 BNC2Q6ZN30 1099 aaPredicted RBP8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 MZB1Q8WU39 189 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 VWCEQ96DN2 955 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 HHIPL1Q96JK4 782 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 TEPSINQ96N21 525 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 FOXP3Q9BZS1 431 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 ADAM7Q9H2U9 754 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 REV1Q9UBZ9 1251 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 PRR36Q9H6K5 1346 aa8.26□□□□□ -1.09
SMCHD1-207ENST00000581711 FAM221AA4D161 298 aa8.25□□□□□ -1.09
SMCHD1-207ENST00000581711 FAM129CQ86XR2 697 aa8.25□□□□□ -1.09
SMCHD1-207ENST00000581711 LUC7LQ9NQ29 371 aaKnown RBP8.25□□□□□ -1.09
SMCHD1-207ENST00000581711 RNF19AQ9NV58 838 aa8.25□□□□□ -1.09
SMCHD1-207ENST00000581711 ZC3H12DA2A288 527 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 ABLIM1O14639 778 aa8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 ERVFRD-1P60508 538 aa8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 PHACTR4Q8IZ21 702 aa8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 PLCD4Q9BRC7 762 aa8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 TCFL5Q9UL49 500 aa8.24□□□□□ -1.09
SMCHD1-207ENST00000581711 PCBP3P57721 371 aaKnown RBP8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 IGDCC3Q8IVU1 814 aa8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 DAGLBQ8NCG7 672 aa8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 TCTN2Q96GX1 697 aa8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 KIF2CQ99661 725 aa8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 TRAIPQ9BWF2 469 aa8.23□□□□□ -1.09
SMCHD1-207ENST00000581711 DNAJA2O60884 412 aa8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 HTR3BO95264 441 aa8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 RTP1P59025 263 aa8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 ZNF655Q8N720 491 aaPredicted RBP8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 LINC01356Q8N9X3 169 aa8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 GATAD2BQ8WXI9 593 aa8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-207ENST00000581711 SSU72P8A0A1W2PR75 194 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 FKTNO75072 461 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 F13A1P00488 732 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 PDIA4P13667 645 aaKnown RBP8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 EFEMP1Q12805 493 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 BBS9Q3SYG4 887 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 FRMD5Q7Z6J6 570 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 LDHDQ86WU2 507 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 PWWP2AQ96N64 755 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 TMPRSS5Q9H3S3 457 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 POLR3KQ9Y2Y1 108 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-207ENST00000581711 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 MPOP05164 745 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 GBP1P32455 592 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 LMNB2Q03252 620 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 SPATS1Q496A3 300 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 ZPBP2Q6X784 338 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 TMC6Q7Z403 805 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 TMC3Q7Z5M5 1100 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 LINC00116Q8NCU8 138 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
SMCHD1-207ENST00000581711 F6X3S4 739 aa8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 SYPP08247 313 aa8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 ST13P50502 369 aaKnown RBP8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 RNF4P78317 190 aa8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 ZXDCQ2QGD7 858 aaPredicted RBP8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 TP53I13Q8NBR0 393 aaPredicted RBP8.19□□□□□ -1.1
SMCHD1-207ENST00000581711 PLP2Q04941 152 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 GALNT18Q6P9A2 607 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms