RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRIB2Q92519 343 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 MOV10L1Q9BXT6 1211 aaKnown RBP23.15■■□□□ 1.3
SREBF1-220ENST00000581707 INCENPQ9NQS7 918 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 DIAPH3Q9NSV4 1193 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 FBXO28Q9NVF7 368 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 IVNS1ABPQ9Y6Y0 642 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 A0A0G2JMZ2 1700 aa23.15■■□□□ 1.3
SREBF1-220ENST00000581707 HIP1O00291 1037 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 NDUFB10O96000 172 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 PTPREP23469 700 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 MAP2K5Q13163 448 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 PLS1Q14651 629 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
SREBF1-220ENST00000581707 SHISA4Q96DD7 197 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 NUP88Q99567 741 aaPredicted RBP23.14■■□□□ 1.29
SREBF1-220ENST00000581707 ADAMTS5Q9UNA0 930 aa23.14■■□□□ 1.29
SREBF1-220ENST00000581707 TSPY2A6NKD2 308 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 SGPL1O95470 568 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 TRIM32Q13049 653 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 CWC27Q6UX04 472 aaKnown RBP23.13■■□□□ 1.29
SREBF1-220ENST00000581707 SHCBP1Q8NEM2 672 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 APBA2Q99767 749 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 PAK6Q9NQU5 681 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-220ENST00000581707 PPP1R9AQ9ULJ8 1098 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 SYNPO2Q9UMS6 1093 aa23.13■■□□□ 1.29
SREBF1-220ENST00000581707 ZMYM6O95789 1325 aa23.12■■□□□ 1.29
SREBF1-220ENST00000581707 ZKSCAN1P17029 563 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-220ENST00000581707 ERCC3P19447 782 aa23.12■■□□□ 1.29
SREBF1-220ENST00000581707 TMEM132BQ14DG7 1078 aa23.12■■□□□ 1.29
SREBF1-220ENST00000581707 DEFB118Q96PH6 123 aa23.12■■□□□ 1.29
SREBF1-220ENST00000581707 TACC3Q9Y6A5 838 aa23.12■■□□□ 1.29
SREBF1-220ENST00000581707 RPTORQ8N122 1335 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 COL11A1P12107 1806 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-220ENST00000581707 VWA5AO00534 786 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 STRNO43815 780 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 ORC4O43929 436 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 RANBP6O60518 1105 aaKnown RBP23.11■■□□□ 1.29
SREBF1-220ENST00000581707 FGRP09769 529 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 GRB14Q14449 540 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 CCL14Q16627 93 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 PPP4R3BQ5MIZ7 849 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
SREBF1-220ENST00000581707 GMCL1P1Q8NEA9 526 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.11■■□□□ 1.29
SREBF1-220ENST00000581707 MROH8Q9H579 483 aa23.11■■□□□ 1.29
SREBF1-220ENST00000581707 HMX1Q9NP08 348 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-220ENST00000581707 TFRCP02786 760 aaKnown RBP23.1■■□□□ 1.29
SREBF1-220ENST00000581707 TTC22Q5TAA0 569 aa23.1■■□□□ 1.29
SREBF1-220ENST00000581707 NCAPG2Q86XI2 1143 aa23.1■■□□□ 1.29
SREBF1-220ENST00000581707 SLF1Q9BQI6 1058 aa23.1■■□□□ 1.29
SREBF1-220ENST00000581707 TOMM22Q9NS69 142 aa23.1■■□□□ 1.29
SREBF1-220ENST00000581707 SLC25A27O95847 323 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 PRKAR2AP13861 404 aaKnown RBP23.09■■□□□ 1.29
SREBF1-220ENST00000581707 CAPN2P17655 700 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 HAND2P61296 217 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 MAP3K21Q5TCX8 1036 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 SLFN13Q68D06 897 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 PRPF38AQ8NAV1 312 aaKnown RBP23.09■■□□□ 1.29
SREBF1-220ENST00000581707 IL17RBQ9NRM6 502 aa23.09■■□□□ 1.29
SREBF1-220ENST00000581707 HOXC6P09630 235 aa23.08■■□□□ 1.29
SREBF1-220ENST00000581707 GSPT1P15170 499 aaKnown RBP23.08■■□□□ 1.29
SREBF1-220ENST00000581707 CACNB2Q08289 660 aaPredicted RBP23.08■■□□□ 1.29
SREBF1-220ENST00000581707 RRP12Q5JTH9 1297 aaKnown RBP23.08■■□□□ 1.29
SREBF1-220ENST00000581707 DPP9Q86TI2 863 aa23.08■■□□□ 1.29
SREBF1-220ENST00000581707 FEM1BQ9UK73 627 aa23.08■■□□□ 1.29
SREBF1-220ENST00000581707 STX8Q9UNK0 236 aa23.08■■□□□ 1.29
SREBF1-220ENST00000581707 NMT2O60551 498 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 ADORA2AP29274 412 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 STAT3P40763 770 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 PRPF38BQ5VTL8 546 aaKnown RBP23.07■■□□□ 1.28
SREBF1-220ENST00000581707 RIOX2Q8IUF8 465 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 REPS2Q8NFH8 660 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 NPLOC4Q8TAT6 608 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
SREBF1-220ENST00000581707 BMP3P12645 472 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 AKNAD1Q5T1N1 836 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 MFSD14CQ5VZR4 134 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 MFSD6Q6ZSS7 791 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 UBE2Q1Q7Z7E8 422 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 ABRAQ8N0Z2 381 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 FLRT1Q9NZU1 646 aa23.06■■□□□ 1.28
SREBF1-220ENST00000581707 ZNF214Q9UL59 606 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-220ENST00000581707 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
SREBF1-220ENST00000581707 ZNF236Q9UL36 1845 aa23.05■■□□□ 1.28
SREBF1-220ENST00000581707 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-220ENST00000581707 PCP11498 1178 aaKnown RBP23.05■■□□□ 1.28
SREBF1-220ENST00000581707 FCER1AP12319 257 aa23.05■■□□□ 1.28
SREBF1-220ENST00000581707 KIFC2Q96AC6 838 aa23.05■■□□□ 1.28
SREBF1-220ENST00000581707 GMCL1Q96IK5 515 aa23.05■■□□□ 1.28
SREBF1-220ENST00000581707 NBPF3Q9H094 633 aa23.05■■□□□ 1.28
SREBF1-220ENST00000581707 ZNF213O14771 459 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 ZBED4O75132 1171 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 COPB2P35606 906 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 NOVP48745 357 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 TBC1D10CQ8IV04 446 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 STAG1Q8WVM7 1258 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 DSCC1Q9BVC3 393 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 RNF41Q9H4P4 317 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-220ENST00000581707 SLC5A4Q9NY91 659 aa23.04■■□□□ 1.28
SREBF1-220ENST00000581707 ISY1Q9ULR0 285 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms