RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 F6X3S4 739 aa6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 IRS4O14654 1257 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 PI3P19957 117 aa6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 KIR2DL1P43626 348 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 KIR2DL2P43627 348 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 EPHB3P54753 998 aa6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 NMIQ13287 307 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 KIF2CQ99661 725 aa6.75□□□□□ -1.33
SMCHD1-206ENST00000581631 ANKRD33BA6NCL7 494 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 RFXAPO00287 272 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 RGS13O14921 159 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 GRIN3BO60391 1043 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 UBOX5O94941 541 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 TNNI2P48788 182 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 YBX1P67809 324 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 BBS9Q3SYG4 887 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 TMEM132EQ6IEE7 984 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 TMC4Q7Z404 712 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 TMEM151BQ8IW70 566 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 SIRT2Q8IXJ6 389 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 DAGLBQ8NCG7 672 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 CXorf38Q8TB03 319 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 TCTN2Q96GX1 697 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 HHIPL1Q96JK4 782 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 RSRP1Q9BUV0 290 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 CNTD2Q9H8S5 307 aa6.74□□□□□ -1.33
SMCHD1-206ENST00000581631 VIPR1P32241 457 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 CEBPAP49715 358 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 MPP2Q14168 576 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 NFIXQ14938 502 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
SMCHD1-206ENST00000581631 SLC22A31A6NKX4 558 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 N4BP3O15049 544 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 SYN1P17600 705 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 WAPLQ7Z5K2 1190 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 TMEFF1Q8IYR6 380 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 PHACTR4Q8IZ21 702 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 LINC00116Q8NCU8 138 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 FBXO27Q8NI29 283 aa6.72□□□□□ -1.33
SMCHD1-206ENST00000581631 PNLIPP16233 465 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 PSMD2Q13200 908 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 SNW1Q13573 536 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 SKOR2Q2VWA4 1001 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 NBPF9Q3BBW0 867 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 CRELD1Q96HD1 420 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 KCNQ5Q9NR82 932 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 IRAK3Q9Y616 596 aa6.71□□□□□ -1.34
SMCHD1-206ENST00000581631 OTOL1A6NHN0 477 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 AFF3P51826 1226 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 CDR1P51861 262 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 NFKB2Q00653 900 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 DIEXFQ68CQ4 756 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 ZPBP2Q6X784 338 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 CEP128Q6ZU80 1094 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 LRRC3Q9BY71 257 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 TCFL5Q9UL49 500 aa6.7□□□□□ -1.34
SMCHD1-206ENST00000581631 SDHBP21912 280 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 RNF4P78317 190 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 FAM160A1Q05DH4 1040 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 DNAJC14Q6Y2X3 702 aaPredicted RBP6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 FAM196AQ6ZSG2 479 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 KLHL14Q9P2G3 628 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 ZMYM5Q9UJ78 669 aa6.69□□□□□ -1.34
SMCHD1-206ENST00000581631 FADS2P1A8MWK0 482 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 ATE1O95260 518 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 PRAMEF1O95521 474 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 GBP1P32455 592 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 KIR3DS1Q14943 382 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 ARSHQ5FYA8 562 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 IGDCC3Q8IVU1 814 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 GOLM1Q8NBJ4 401 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 FCRL2Q96LA5 508 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 TRAIPQ9BWF2 469 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 ASCC2Q9H1I8 757 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 SIRT5Q9NXA8 310 aa6.68□□□□□ -1.34
SMCHD1-206ENST00000581631 SIGLEC6O43699 453 aa6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 GBP2P32456 591 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 SLC14A2Q15849 920 aa6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 FAM129CQ86XR2 697 aa6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 RELL1Q8IUW5 271 aa6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 MZB1Q8WU39 189 aa6.67□□□□□ -1.34
SMCHD1-206ENST00000581631 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.67□□□□□ -1.343e-7■■■■□ 21.5
SMCHD1-206ENST00000581631 SYPP08247 313 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms