RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 BMP3P12645 472 aa18.69■□□□□ 0.58
CCDC57-213ENST00000581625 RBM25P49756 843 aaKnown RBP18.69■□□□□ 0.58
CCDC57-213ENST00000581625 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
CCDC57-213ENST00000581625 RUFY3Q7L099 469 aa18.69■□□□□ 0.58
CCDC57-213ENST00000581625 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 TLR2O60603 784 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 TRPA1O75762 1119 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 DDAH1O94760 285 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 PDHBP11177 359 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 FGD1P98174 961 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 CRHR2Q13324 411 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
CCDC57-213ENST00000581625 GPATCH4Q5T3I0 446 aaKnown RBP18.68■□□□□ 0.58
CCDC57-213ENST00000581625 LBX2Q6XYB7 198 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 SGMS1Q86VZ5 419 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 FBXL16Q8N461 479 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 PCNTO95613 3336 aa18.68■□□□□ 0.58
CCDC57-213ENST00000581625 A0A0G2JMZ2 1700 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 FLOT1O75955 427 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 CYP2C8P10632 490 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 GCLCP48506 637 aaPredicted RBP18.67■□□□□ 0.58
CCDC57-213ENST00000581625 STAT2P52630 851 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 HERVK_113P62684 666 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 CCDC96Q2M329 555 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 NOM1Q5C9Z4 860 aaKnown RBP18.67■□□□□ 0.58
CCDC57-213ENST00000581625 NFXL1Q6ZNB6 911 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 CATIPQ7Z7H3 387 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 FAM160B2Q86V87 743 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 NUP88Q99567 741 aaPredicted RBP18.67■□□□□ 0.58
CCDC57-213ENST00000581625 HOXC10Q9NYD6 342 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 FEM1BQ9UK73 627 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 ISY1Q9ULR0 285 aaKnown RBP18.67■□□□□ 0.58
CCDC57-213ENST00000581625 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
CCDC57-213ENST00000581625 PLA2G6O60733 806 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 HSPA1AP0DMV8 641 aaKnown RBP18.66■□□□□ 0.58
CCDC57-213ENST00000581625 HSPA1BP0DMV9 641 aaKnown RBP18.66■□□□□ 0.58
CCDC57-213ENST00000581625 CALM1P0DP23 149 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 CALM2P0DP24 149 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 CALM3P0DP25 149 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 COG2Q14746 738 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 TCEANC2Q96MN5 208 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 MAP3K14Q99558 947 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
CCDC57-213ENST00000581625 PPP1R9AQ9ULJ8 1098 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 MTMR7Q9Y216 660 aa18.66■□□□□ 0.58
CCDC57-213ENST00000581625 PARP14Q460N5 1801 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 SPDYE16A6NNV3 312 aaPredicted RBP18.65■□□□□ 0.58
CCDC57-213ENST00000581625 CPA1P15085 419 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 RCAN1P53805 252 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 CHURC1Q8WUH1 139 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 SLF1Q9BQI6 1058 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 SENP2Q9HC62 589 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
CCDC57-213ENST00000581625 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 TBC1D8O95759 1140 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
CCDC57-213ENST00000581625 FDX1P10109 184 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 DSG3P32926 999 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 TROAPQ12815 778 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-213ENST00000581625 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 Q6ZUG5 572 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 KCTD1Q719H9 257 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
CCDC57-213ENST00000581625 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
CCDC57-213ENST00000581625 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
CCDC57-213ENST00000581625 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-213ENST00000581625 KIF5BP33176 963 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 GRM4Q14833 912 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 APOA5Q6Q788 366 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 BTNL9Q6UXG8 535 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 CTCFLQ8NI51 663 aaPredicted RBP18.63■□□□□ 0.57
CCDC57-213ENST00000581625 BRF1Q92994 677 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 PDRG1Q9NUG6 133 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 FBXO28Q9NVF7 368 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 RABGAP1Q9Y3P9 1069 aa18.63■□□□□ 0.57
CCDC57-213ENST00000581625 FRMPD2Q68DX3 1309 aaPredicted RBP18.63■□□□□ 0.57
CCDC57-213ENST00000581625 RLFQ13129 1914 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 BCRP11274 1271 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 CTCFP49711 727 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-213ENST00000581625 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 KIFC2Q96AC6 838 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 ATG4CQ96DT6 458 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-213ENST00000581625 CPA4Q9UI42 421 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 ADAMTS5Q9UNA0 930 aa18.62■□□□□ 0.57
CCDC57-213ENST00000581625 NID2Q14112 1375 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 KLF18A0A0U1RQI7 1052 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 GPR25O00155 361 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms