RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SLITRK4Q8IW52 837 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 SEC16BQ96JE7 1060 aa7.32□□□□□ -1.24
SMCHD1-205ENST00000581383 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.32□□□□□ -1.242e-12■□□□□ 10.8
SMCHD1-205ENST00000581383 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 ESR1P03372 595 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 REC114Q7Z4M0 266 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 REV1Q9UBZ9 1251 aa7.31□□□□□ -1.24
SMCHD1-205ENST00000581383 TCAF2A6NFQ2 919 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 FGRP09769 529 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 ERVFC1P60507 584 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 TMEM132EQ6IEE7 984 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 DTWD2Q8NBA8 298 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 DNAJB8Q8NHS0 232 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 KCNN1Q92952 543 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 Q96M66 194 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 LRRC3Q9BY71 257 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 BRMS1Q9HCU9 246 aa7.3□□□□□ -1.24
SMCHD1-205ENST00000581383 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 TSPAN15O95858 294 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 SOX9P48436 509 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 BAHD1Q8TBE0 780 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 GPR62Q9BZJ7 368 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 PPT2Q9UMR5 302 aa7.29□□□□□ -1.24
SMCHD1-205ENST00000581383 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 LRRN2O75325 713 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 HTR3BO95264 441 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 SSBP05455 408 aaKnown RBP eCLIP7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 C1QTNF9P0C862 333 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 TRHRP34981 398 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 ZNF165P49910 485 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 COL9A2Q14055 689 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 FBXW10Q5XX13 1052 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 CCDC81Q6ZN84 652 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 GK5Q6ZS86 529 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 PDZD8Q8NEN9 1154 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 UBXN4Q92575 508 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 C19orf44Q9H6X5 657 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 POLR3KQ9Y2Y1 108 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
SMCHD1-205ENST00000581383 RBAK-RBAKDNI3L0D1 243 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 RAG1P15918 1043 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 PDE6BP35913 854 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 CLCQ05315 142 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 DUSP4Q13115 394 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 TMEM201Q5SNT2 666 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 SPOCD1Q6ZMY3 1216 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 KREMEN1Q96MU8 473 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 KIF2CQ99661 725 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 ASPNQ9BXN1 380 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 GPR160Q9UJ42 338 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 PCDHB14Q9Y5E9 798 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
SMCHD1-205ENST00000581383 FITM1A5D6W6 292 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 CIAPIN1Q6FI81 312 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 ATG14Q6ZNE5 492 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 LILRA2Q8N149 483 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 REXO1Q8N1G1 1221 aaKnown RBP7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 FERD3LQ96RJ6 166 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 SLC26A8Q96RN1 970 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 DNAJC2Q99543 621 aaKnown RBP7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 SLC6A17Q9H1V8 727 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 KCNK12Q9HB15 430 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 ZMYM5Q9UJ78 669 aa7.26□□□□□ -1.25
SMCHD1-205ENST00000581383 HPXP02790 462 aa7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 RPL10P27635 214 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 CFPP27918 469 aa7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 SRRTQ9BXP5 876 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 RNF32Q9H0A6 362 aa7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 EHMT1Q9H9B1 1298 aa7.25□□□□□ -1.25
SMCHD1-205ENST00000581383 STK10O94804 968 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 ZSCAN22P10073 491 aaPredicted RBP7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 ETFBP38117 255 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 RNF4P78317 190 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 CHRNEQ04844 493 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 SLC14A2Q15849 920 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 ZNF605Q86T29 641 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 CRBNQ96SW2 442 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 STRIP2Q9ULQ0 834 aa7.24□□□□□ -1.25
SMCHD1-205ENST00000581383 ATE1O95260 518 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 ZGLP1P0C6A0 271 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 GAB4Q2WGN9 574 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 ARSHQ5FYA8 562 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 ZNF408Q9H9D4 720 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 CWC22Q9HCG8 908 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms