RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
SUPT4H1-205ENST00000581166 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
SUPT4H1-205ENST00000581166 ZMYM6O95789 1325 aa16.69■□□□□ 0.26
SUPT4H1-205ENST00000581166 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 PTPREP23469 700 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 SHCBP1Q8NEM2 672 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 TRIB2Q92519 343 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 SHISA4Q96DD7 197 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
SUPT4H1-205ENST00000581166 NDUFB10O96000 172 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 FGRP09769 529 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 CAPN2P17655 700 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 GRB14Q14449 540 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 CWC27Q6UX04 472 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 APBA2Q99767 749 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 PAK6Q9NQU5 681 aaPredicted RBP16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 FBXO28Q9NVF7 368 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 PDE4DIPQ5VU43 2346 aa16.67■□□□□ 0.26
SUPT4H1-205ENST00000581166 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 STRNO43815 780 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 ORC4O43929 436 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 SGPL1O95470 568 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 TACC3Q9Y6A5 838 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
SUPT4H1-205ENST00000581166 COL11A1P12107 1806 aaPredicted RBP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 VWA5AO00534 786 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 HOXC6P09630 235 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 ERCC3P19447 782 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 TRIM32Q13049 653 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 PLS1Q14651 629 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 MAP3K21Q5TCX8 1036 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 LRRC47Q8N1G4 583 aaKnown RBP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 SLF1Q9BQI6 1058 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 MROH8Q9H579 483 aa16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
SUPT4H1-205ENST00000581166 SLC25A27O95847 323 aa16.64■□□□□ 0.25
SUPT4H1-205ENST00000581166 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
SUPT4H1-205ENST00000581166 CCL14Q16627 93 aa16.64■□□□□ 0.25
SUPT4H1-205ENST00000581166 PRPF38AQ8NAV1 312 aaKnown RBP16.64■□□□□ 0.25
SUPT4H1-205ENST00000581166 ZNF236Q9UL36 1845 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 RIOX2Q8IUF8 465 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 CRISPLD2Q9H0B8 497 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
SUPT4H1-205ENST00000581166 NMT2O60551 498 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 TFRCP02786 760 aaKnown RBP16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 ADORA2AP29274 412 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 STAT3P40763 770 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 NOVP48745 357 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 HAND2P61296 217 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 PRPF38BQ5VTL8 546 aaKnown RBP16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 UBE2Q1Q7Z7E8 422 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 ABRAQ8N0Z2 381 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 NPLOC4Q8TAT6 608 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 BMP3P12645 472 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 COPB2P35606 906 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
SUPT4H1-205ENST00000581166 ZNF213O14771 459 aa16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 FCER1AP12319 257 aa16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 MFSD14CQ5VZR4 134 aa16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
SUPT4H1-205ENST00000581166 ATP2A1O14983 1001 aa16.6■□□□□ 0.25
SUPT4H1-205ENST00000581166 COBLO75128 1261 aa16.6■□□□□ 0.25
SUPT4H1-205ENST00000581166 ZBED4O75132 1171 aa16.6■□□□□ 0.25
SUPT4H1-205ENST00000581166 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms